RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 SLC25A27O95847 323 aa23.64■■□□□ 1.37
NDUFS3-212ENST00000534208 BMP8BP34820 402 aa23.64■■□□□ 1.37
NDUFS3-212ENST00000534208 TMEM132BQ14DG7 1078 aa23.64■■□□□ 1.37
NDUFS3-212ENST00000534208 NCAPG2Q86XI2 1143 aa23.64■■□□□ 1.37
NDUFS3-212ENST00000534208 TRPV1Q8NER1 839 aa23.64■■□□□ 1.37
NDUFS3-212ENST00000534208 PI4K2BQ8TCG2 481 aa23.64■■□□□ 1.37
NDUFS3-212ENST00000534208 MKNK2Q9HBH9 465 aa23.64■■□□□ 1.37
NDUFS3-212ENST00000534208 MINDY4BA8MYZ0 360 aa23.63■■□□□ 1.37
NDUFS3-212ENST00000534208 M0R2C6 588 aa23.63■■□□□ 1.37
NDUFS3-212ENST00000534208 FBXO28Q9NVF7 368 aa23.63■■□□□ 1.37
NDUFS3-212ENST00000534208 NYAP2Q9P242 653 aa23.63■■□□□ 1.37
NDUFS3-212ENST00000534208 PPP1R9AQ9ULJ8 1098 aa23.63■■□□□ 1.37
NDUFS3-212ENST00000534208 ZMYND8Q9ULU4 1186 aaPredicted RBP23.63■■□□□ 1.37
NDUFS3-212ENST00000534208 COL11A1P12107 1806 aaPredicted RBP23.63■■□□□ 1.37
NDUFS3-212ENST00000534208 VWA5AO00534 786 aa23.62■■□□□ 1.37
NDUFS3-212ENST00000534208 CNGA1P29973 690 aa23.62■■□□□ 1.37
NDUFS3-212ENST00000534208 RRP1P56182 461 aaKnown RBP23.62■■□□□ 1.37
NDUFS3-212ENST00000534208 RIOX2Q8IUF8 465 aa23.62■■□□□ 1.37
NDUFS3-212ENST00000534208 ZNF287Q9HBT7 754 aa23.62■■□□□ 1.37
NDUFS3-212ENST00000534208 LAMA3Q16787 3333 aa23.61■■□□□ 1.37
NDUFS3-212ENST00000534208 PATL2C9JE40 543 aaKnown RBP23.61■■□□□ 1.37
NDUFS3-212ENST00000534208 FCER1AP12319 257 aa23.61■■□□□ 1.37
NDUFS3-212ENST00000534208 TDO2P48775 406 aa23.61■■□□□ 1.37
NDUFS3-212ENST00000534208 FAM83BQ5T0W9 1011 aa23.61■■□□□ 1.37
NDUFS3-212ENST00000534208 SAMD1Q6SPF0 538 aaPredicted RBP23.61■■□□□ 1.37
NDUFS3-212ENST00000534208 OTUD7AQ8TE49 926 aaPredicted RBP23.61■■□□□ 1.37
NDUFS3-212ENST00000534208 DNAH12Q6ZR08 3092 aa23.61■■□□□ 1.37
NDUFS3-212ENST00000534208 IGKV6D-41A0A0C4DH26 115 aa23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 APPP05067 770 aa23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 MX1P20591 662 aa23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 COPB2P35606 906 aa23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 STAT3P40763 770 aa23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 LRRC26Q2I0M4 334 aa23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 IFNL3Q8IZI9 196 aa23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 REPS2Q8NFH8 660 aa23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 ZNF214Q9UL59 606 aaPredicted RBP23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 ZNFX1Q9P2E3 1918 aaKnown RBP23.6■■□□□ 1.37
NDUFS3-212ENST00000534208 DNM1LO00429 736 aa23.59■■□□□ 1.37
NDUFS3-212ENST00000534208 RAD21O60216 631 aa23.59■■□□□ 1.37
NDUFS3-212ENST00000534208 SYN1P17600 705 aa23.59■■□□□ 1.37
NDUFS3-212ENST00000534208 STK11IPQ8N1F8 1099 aa23.59■■□□□ 1.37
NDUFS3-212ENST00000534208 MAML3Q96JK9 1138 aa23.59■■□□□ 1.37
NDUFS3-212ENST00000534208 NACAP1Q9BZK3 213 aa23.59■■□□□ 1.37
NDUFS3-212ENST00000534208 SYNPO2Q9UMS6 1093 aa23.59■■□□□ 1.37
NDUFS3-212ENST00000534208 SALL3Q9BXA9 1300 aa23.59■■□□□ 1.37
NDUFS3-212ENST00000534208 F5H6K3 240 aa23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 SEPT4O43236 478 aa23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 KLRC3Q07444 240 aa23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 ZMYM1Q5SVZ6 1142 aa23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 ZNF444Q8N0Y2 327 aaPredicted RBP23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 MKL1Q969V6 931 aa23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 SEC62Q99442 399 aaKnown RBP23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 SLF1Q9BQI6 1058 aa23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 FSD1Q9BTV5 496 aa23.58■■□□□ 1.37
NDUFS3-212ENST00000534208 NDUFB10O96000 172 aa23.57■■□□□ 1.36
NDUFS3-212ENST00000534208 MAGEA10P43363 369 aaPredicted RBP23.57■■□□□ 1.36
NDUFS3-212ENST00000534208 ARRDC4Q8NCT1 418 aa23.57■■□□□ 1.36
NDUFS3-212ENST00000534208 MMP19Q99542 508 aa23.57■■□□□ 1.36
NDUFS3-212ENST00000534208 SENP6Q9GZR1 1112 aaPredicted RBP23.57■■□□□ 1.36
NDUFS3-212ENST00000534208 NRBP1Q9UHY1 535 aa23.57■■□□□ 1.36
NDUFS3-212ENST00000534208 DIS3Q9Y2L1 958 aaKnown RBP23.57■■□□□ 1.36
NDUFS3-212ENST00000534208 MYH4Q9Y623 1939 aa23.57■■□□□ 1.36
NDUFS3-212ENST00000534208 PLIN4Q96Q06 1357 aa23.56■■□□□ 1.36
NDUFS3-212ENST00000534208 PRDM1O75626 825 aa23.56■■□□□ 1.36
NDUFS3-212ENST00000534208 KCTD2Q14681 263 aa23.56■■□□□ 1.36
NDUFS3-212ENST00000534208 NUP88Q99567 741 aaPredicted RBP23.56■■□□□ 1.36
NDUFS3-212ENST00000534208 MTMR4Q9NYA4 1195 aa23.56■■□□□ 1.36
NDUFS3-212ENST00000534208 CLIP2Q9UDT6 1046 aa23.56■■□□□ 1.36
NDUFS3-212ENST00000534208 SOX1O00570 391 aaPredicted RBP23.55■■□□□ 1.36
NDUFS3-212ENST00000534208 PDE4BQ07343 736 aa23.55■■□□□ 1.36
NDUFS3-212ENST00000534208 ZNF792Q3KQV3 632 aa23.55■■□□□ 1.36
NDUFS3-212ENST00000534208 PRPF38AQ8NAV1 312 aaKnown RBP23.55■■□□□ 1.36
NDUFS3-212ENST00000534208 CEP95Q96GE4 821 aa23.55■■□□□ 1.36
NDUFS3-212ENST00000534208 TEX13BQ9BXU2 312 aa23.55■■□□□ 1.36
NDUFS3-212ENST00000534208 PLXNA1Q9UIW2 1896 aa23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 ATP2A1O14983 1001 aa23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 TTLL1O95922 423 aa23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 PGK2P07205 417 aa23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 SLC3A2P08195 630 aaKnown RBP23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 GMCL1P1Q8NEA9 526 aa23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 NEDD1Q8NHV4 660 aa23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 CRBNQ96SW2 442 aa23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 NAPBQ9H115 298 aa23.54■■□□□ 1.36
NDUFS3-212ENST00000534208 PPARAQ07869 468 aa23.53■■□□□ 1.36
NDUFS3-212ENST00000534208 HDAC1Q13547 482 aaPredicted RBP23.53■■□□□ 1.36
NDUFS3-212ENST00000534208 PRAMEF19Q5SWL8 479 aa23.53■■□□□ 1.36
NDUFS3-212ENST00000534208 GJC2Q5T442 439 aaPredicted RBP23.53■■□□□ 1.36
NDUFS3-212ENST00000534208 TINF2Q9BSI4 451 aa23.53■■□□□ 1.36
NDUFS3-212ENST00000534208 ZBTB47Q9UFB7 747 aaPredicted RBP23.53■■□□□ 1.36
NDUFS3-212ENST00000534208 ANKRD45Q5TZF3 282 aa23.52■■□□□ 1.36
NDUFS3-212ENST00000534208 SNRNP48Q6IEG0 339 aaKnown RBP23.52■■□□□ 1.36
NDUFS3-212ENST00000534208 TDHQ8IZJ6 230 aa23.52■■□□□ 1.36
NDUFS3-212ENST00000534208 KBTBD13C9JR72 458 aa23.51■■□□□ 1.35
NDUFS3-212ENST00000534208 FOXP2O15409 715 aa23.51■■□□□ 1.35
NDUFS3-212ENST00000534208 TSPY3P0CV98 308 aa23.51■■□□□ 1.35
NDUFS3-212ENST00000534208 TSPY8P0CW00 308 aa23.51■■□□□ 1.35
NDUFS3-212ENST00000534208 LRIT3Q3SXY7 679 aa23.51■■□□□ 1.35
NDUFS3-212ENST00000534208 ANO1Q5XXA6 986 aa23.51■■□□□ 1.35
NDUFS3-212ENST00000534208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.51■■□□□ 1.35
NDUFS3-212ENST00000534208 EVI5LQ96CN4 794 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms