RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 ADAMTS5Q9UNA0 930 aa25.31■■□□□ 1.64
FDFT1-220ENST00000531733 MS4A1P11836 297 aa25.3■■□□□ 1.64
FDFT1-220ENST00000531733 FAM47AQ5JRC9 791 aa25.3■■□□□ 1.64
FDFT1-220ENST00000531733 ABRAQ8N0Z2 381 aa25.3■■□□□ 1.64
FDFT1-220ENST00000531733 ARRDC4Q8NCT1 418 aa25.3■■□□□ 1.64
FDFT1-220ENST00000531733 LBHD1Q9BQE6 289 aaPredicted RBP25.3■■□□□ 1.64
FDFT1-220ENST00000531733 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.3■■□□□ 1.64
FDFT1-220ENST00000531733 SLC4A4Q9Y6R1 1079 aa25.3■■□□□ 1.64
FDFT1-220ENST00000531733 SMCHD1A6NHR9 2005 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 POTEB2H3BUK9 544 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 PGK2P07205 417 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 LRRC41Q15345 812 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 UBE3CQ15386 1083 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 TRIM60Q495X7 471 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 FERMT2Q96AC1 680 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 CCDC17Q96LX7 622 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.29■■□□□ 1.64
FDFT1-220ENST00000531733 SH2D4AQ9H788 454 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 EYSQ5T1H1 3165 aa25.29■■□□□ 1.64
FDFT1-220ENST00000531733 KBTBD13C9JR72 458 aa25.28■■□□□ 1.64
FDFT1-220ENST00000531733 FCER1AP12319 257 aa25.28■■□□□ 1.64
FDFT1-220ENST00000531733 ADCYAP1R1P41586 468 aa25.28■■□□□ 1.64
FDFT1-220ENST00000531733 C20orf194Q5TEA3 1177 aa25.28■■□□□ 1.64
FDFT1-220ENST00000531733 DIEXFQ68CQ4 756 aaKnown RBP25.28■■□□□ 1.64
FDFT1-220ENST00000531733 SH3RF1Q7Z6J0 888 aa25.28■■□□□ 1.64
FDFT1-220ENST00000531733 GUCD1Q96NT3 240 aa25.28■■□□□ 1.64
FDFT1-220ENST00000531733 TAL1P17542 331 aaPredicted RBP25.27■■□□□ 1.64
FDFT1-220ENST00000531733 SNX17Q15036 470 aa25.27■■□□□ 1.64
FDFT1-220ENST00000531733 C9orf50Q5SZB4 431 aa25.27■■□□□ 1.64
FDFT1-220ENST00000531733 REPS2Q8NFH8 660 aa25.27■■□□□ 1.64
FDFT1-220ENST00000531733 FAM161BQ96MY7 647 aa25.27■■□□□ 1.64
FDFT1-220ENST00000531733 GREB1LQ9C091 1923 aaPredicted RBP25.27■■□□□ 1.64
FDFT1-220ENST00000531733 PLXNA1Q9UIW2 1896 aa25.26■■□□□ 1.63
FDFT1-220ENST00000531733 FAM83BQ5T0W9 1011 aa25.26■■□□□ 1.63
FDFT1-220ENST00000531733 STK11IPQ8N1F8 1099 aa25.26■■□□□ 1.63
FDFT1-220ENST00000531733 MMP19Q99542 508 aa25.26■■□□□ 1.63
FDFT1-220ENST00000531733 KANSL2Q9H9L4 492 aa25.26■■□□□ 1.63
FDFT1-220ENST00000531733 PRDM5Q9NQX1 630 aaPredicted RBP25.26■■□□□ 1.63
FDFT1-220ENST00000531733 SLC5A4Q9NY91 659 aa25.26■■□□□ 1.63
FDFT1-220ENST00000531733 TRIM43BA6NCK2 446 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 VWA5AO00534 786 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 SLC25A27O95847 323 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 SHHQ15465 462 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 RIOX2Q8IUF8 465 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 BADQ92934 168 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 TRIM43Q96BQ3 446 aaPredicted RBP25.25■■□□□ 1.63
FDFT1-220ENST00000531733 LENG1Q96BZ8 264 aaPredicted RBP25.25■■□□□ 1.63
FDFT1-220ENST00000531733 NUP88Q99567 741 aaPredicted RBP25.25■■□□□ 1.63
FDFT1-220ENST00000531733 PDLIM7Q9NR12 457 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 PRKAG2Q9UGJ0 569 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 ZNF214Q9UL59 606 aaPredicted RBP25.25■■□□□ 1.63
FDFT1-220ENST00000531733 PPP1R9AQ9ULJ8 1098 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 CUL9Q8IWT3 2517 aa25.25■■□□□ 1.63
FDFT1-220ENST00000531733 RAD21O60216 631 aa25.24■■□□□ 1.63
FDFT1-220ENST00000531733 ZNF792Q3KQV3 632 aa25.24■■□□□ 1.63
FDFT1-220ENST00000531733 AMOTL1Q8IY63 956 aa25.24■■□□□ 1.63
FDFT1-220ENST00000531733 STRBPQ96SI9 672 aaKnown RBP25.24■■□□□ 1.63
FDFT1-220ENST00000531733 STAT3P40763 770 aa25.23■■□□□ 1.63
FDFT1-220ENST00000531733 FAM109BQ6ICB4 259 aaPredicted RBP25.23■■□□□ 1.63
FDFT1-220ENST00000531733 LRRCC1Q9C099 1032 aa25.23■■□□□ 1.63
FDFT1-220ENST00000531733 PGK1P00558 417 aa25.22■■□□□ 1.63
FDFT1-220ENST00000531733 RASA1P20936 1047 aa25.22■■□□□ 1.63
FDFT1-220ENST00000531733 ITGB8P26012 769 aa25.22■■□□□ 1.63
FDFT1-220ENST00000531733 TSHZ3Q63HK5 1081 aa25.22■■□□□ 1.63
FDFT1-220ENST00000531733 TINF2Q9BSI4 451 aa25.22■■□□□ 1.63
FDFT1-220ENST00000531733 GOPCQ9HD26 462 aa25.22■■□□□ 1.63
FDFT1-220ENST00000531733 XPNPEP3Q9NQH7 507 aa25.22■■□□□ 1.63
FDFT1-220ENST00000531733 GSG1L2A8MUP6 293 aa25.21■■□□□ 1.63
FDFT1-220ENST00000531733 ZNF865P0CJ78 1059 aaPredicted RBP25.21■■□□□ 1.63
FDFT1-220ENST00000531733 TLE2Q04725 743 aa25.21■■□□□ 1.63
FDFT1-220ENST00000531733 OSBP2Q969R2 916 aa25.21■■□□□ 1.63
FDFT1-220ENST00000531733 DDRGK1Q96HY6 314 aa25.21■■□□□ 1.63
FDFT1-220ENST00000531733 ARPP21Q9UBL0 812 aaPredicted RBP25.21■■□□□ 1.63
FDFT1-220ENST00000531733 PHF24Q9UPV7 400 aa25.21■■□□□ 1.63
FDFT1-220ENST00000531733 KCTD2Q14681 263 aa25.2■■□□□ 1.62
FDFT1-220ENST00000531733 C1orf53Q5VUE5 145 aa25.2■■□□□ 1.62
FDFT1-220ENST00000531733 RCAN3Q9UKA8 241 aa25.2■■□□□ 1.62
FDFT1-220ENST00000531733 RIPK3Q9Y572 518 aa25.2■■□□□ 1.62
FDFT1-220ENST00000531733 CDH23Q9H251 3354 aa25.19■■□□□ 1.62
FDFT1-220ENST00000531733 RARBP10826 455 aa25.19■■□□□ 1.62
FDFT1-220ENST00000531733 SBK1Q52WX2 424 aa25.19■■□□□ 1.62
FDFT1-220ENST00000531733 ZSCAN25Q6NSZ9 544 aa25.19■■□□□ 1.62
FDFT1-220ENST00000531733 EPB41L4AQ9HCS5 686 aaPredicted RBP25.19■■□□□ 1.62
FDFT1-220ENST00000531733 ECHDC1Q9NTX5 307 aa25.19■■□□□ 1.62
FDFT1-220ENST00000531733 NRBP1Q9UHY1 535 aa25.19■■□□□ 1.62
FDFT1-220ENST00000531733 DIS3Q9Y2L1 958 aaKnown RBP25.19■■□□□ 1.62
FDFT1-220ENST00000531733 PRUNE2Q8WUY3 3088 aa25.18■■□□□ 1.62
FDFT1-220ENST00000531733 NDUFB10O96000 172 aa25.18■■□□□ 1.62
FDFT1-220ENST00000531733 MINDY4BA8MYZ0 360 aa25.17■■□□□ 1.62
FDFT1-220ENST00000531733 F5H6K3 240 aa25.17■■□□□ 1.62
FDFT1-220ENST00000531733 EPHB4P54760 987 aa25.17■■□□□ 1.62
FDFT1-220ENST00000531733 KLRC3Q07444 240 aa25.17■■□□□ 1.62
FDFT1-220ENST00000531733 SLF1Q9BQI6 1058 aa25.17■■□□□ 1.62
FDFT1-220ENST00000531733 ROBO3Q96MS0 1386 aa25.17■■□□□ 1.62
FDFT1-220ENST00000531733 IGKV6D-41A0A0C4DH26 115 aa25.16■■□□□ 1.62
FDFT1-220ENST00000531733 A0A1W2PQ45 241 aaPredicted RBP25.16■■□□□ 1.62
FDFT1-220ENST00000531733 A0A1W2PQY0 241 aa25.16■■□□□ 1.62
FDFT1-220ENST00000531733 ADAMTS4O75173 837 aa25.16■■□□□ 1.62
FDFT1-220ENST00000531733 IRX5P78411 483 aaPredicted RBP25.16■■□□□ 1.62
FDFT1-220ENST00000531733 ZNF697Q5TEC3 545 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms