RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TTF2Q9UNY4 1162 aaKnown RBP13.86□□□□□ -0.19
SCN3B-206ENST00000530277 MROH7-TTC4A0A0A0MT08 1334 aa13.86□□□□□ -0.19
SCN3B-206ENST00000530277 TSGA10IPQ3SY00 556 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 CLEC10AQ8IUN9 316 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 REXO1Q8N1G1 1221 aaKnown RBP13.85□□□□□ -0.19
SCN3B-206ENST00000530277 TECPR2O15040 1411 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 B4DLN1 442 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 SNAP25P60880 206 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 WDR78Q5VTH9 848 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 DPP8Q6V1X1 898 aaPredicted RBP13.85□□□□□ -0.19
SCN3B-206ENST00000530277 FERMT2Q96AC1 680 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 ALS2CR12Q96Q35 445 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
SCN3B-206ENST00000530277 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 SMIM23A6NLE4 172 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 ZEB2O60315 1214 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 TBCAO75347 108 aaKnown RBP13.85□□□□□ -0.19
SCN3B-206ENST00000530277 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 RRAGAQ7L523 313 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 MEGF6O75095 1541 aa13.85□□□□□ -0.19
SCN3B-206ENST00000530277 TMEM110-MUSTN1A8MSY1 372 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 KLRK1P26718 216 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 OAS2P29728 719 aaKnown RBP13.84□□□□□ -0.19
SCN3B-206ENST00000530277 METTL16Q86W50 562 aaKnown RBP13.84□□□□□ -0.19
SCN3B-206ENST00000530277 FAM114A1Q8IWE2 563 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 WDR66Q8TBY9 1149 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 CUL5Q93034 780 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 NAPGQ99747 312 aaPredicted RBP13.84□□□□□ -0.19
SCN3B-206ENST00000530277 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 PPP6R2O75170 966 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 CUL4BQ13620 913 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 RPN1P04843 607 aaKnown RBP13.84□□□□□ -0.19
SCN3B-206ENST00000530277 CXCR5P32302 372 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 LIFRP42702 1097 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 PLCD1P51178 756 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 LLGL1Q15334 1064 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 NCAPH2Q6IBW4 605 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 HPS3Q969F9 1004 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 KANSL2Q9H9L4 492 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 SPTLC3Q9NUV7 552 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 DIP2BQ9P265 1576 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 NCAPD2Q15021 1401 aa13.84□□□□□ -0.19
SCN3B-206ENST00000530277 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 BUB1O43683 1085 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 SLC1A4P43007 532 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 UBXN2AP68543 259 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 FMR1Q06787 632 aaKnown RBP eCLIP13.83□□□□□ -0.19
SCN3B-206ENST00000530277 CALCRLQ16602 461 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 SPATA1Q5VX52 437 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 IQCEQ6IPM2 695 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 KCTD1Q719H9 257 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 CTNNBL1Q8WYA6 563 aaPredicted RBP13.83□□□□□ -0.19
SCN3B-206ENST00000530277 FOXP1Q9H334 677 aaPredicted RBP13.83□□□□□ -0.19
SCN3B-206ENST00000530277 USP21Q9UK80 565 aa13.83□□□□□ -0.19
SCN3B-206ENST00000530277 TACC1O75410 805 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 FGFR1OPO95684 399 aaKnown RBP13.83□□□□□ -0.2
SCN3B-206ENST00000530277 C10orf67Q8IYJ2 551 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 JAKMIP2Q96AA8 810 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 RNF26Q9BY78 433 aaPredicted RBP13.83□□□□□ -0.2
SCN3B-206ENST00000530277 TRIM31Q9BZY9 425 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 UBE4AQ14139 1066 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 MAP9Q49MG5 647 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
SCN3B-206ENST00000530277 STAG2Q8N3U4 1231 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 CEP112Q8N8E3 955 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 PAGE5Q96GU1 130 aa13.83□□□□□ -0.2
SCN3B-206ENST00000530277 CYP26C1Q6V0L0 522 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 IGDCC4Q8TDY8 1250 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 PIGSQ96S52 555 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 HOMER2Q9NSB8 354 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 USP40Q9NVE5 1235 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 PPP1R12BO60237 982 aaPredicted RBP13.82□□□□□ -0.2
SCN3B-206ENST00000530277 SH3RF3Q8TEJ3 882 aaPredicted RBP13.82□□□□□ -0.2
SCN3B-206ENST00000530277 PYM1Q9BRP8 204 aaKnown RBP13.82□□□□□ -0.2
SCN3B-206ENST00000530277 FUCA2Q9BTY2 467 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 PALLDQ8WX93 1383 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 PTPREP23469 700 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 UTP14CQ5TAP6 766 aaKnown RBP13.82□□□□□ -0.2
SCN3B-206ENST00000530277 VSTM4Q8IW00 320 aa13.82□□□□□ -0.2
SCN3B-206ENST00000530277 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
SCN3B-206ENST00000530277 SORBS3O60504 671 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 CFBP00751 764 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 SLFN14P0C7P3 912 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 KRT83P78385 493 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 RNF187Q5TA31 235 aaPredicted RBP13.81□□□□□ -0.2
SCN3B-206ENST00000530277 E4F1Q66K89 784 aaPredicted RBP13.81□□□□□ -0.2
SCN3B-206ENST00000530277 CPDO75976 1380 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 UTYO14607 1347 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.81□□□□□ -0.2
SCN3B-206ENST00000530277 CLCN6P51797 869 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 COPB1P53618 953 aaKnown RBP13.81□□□□□ -0.2
SCN3B-206ENST00000530277 UBE2SQ16763 222 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 RESP18Q5W5W9 173 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 ARPP21Q9UBL0 812 aaPredicted RBP13.81□□□□□ -0.2
SCN3B-206ENST00000530277 KIF20BQ96Q89 1820 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms