RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 GJB1P08034 283 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 ERCC3P19447 782 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 PTPREP23469 700 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 MAP2K5Q13163 448 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 PPP4R3BQ5MIZ7 849 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 TTC22Q5TAA0 569 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 SLFN13Q68D06 897 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 TRMT44Q8IYL2 757 aaKnown RBP16.92■□□□□ 0.3
CAPN1-216ENST00000528739 KIFC2Q96AC6 838 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 DEFB118Q96PH6 123 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 HMX1Q9NP08 348 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-216ENST00000528739 MGAMO43451 1857 aa16.92■□□□□ 0.3
CAPN1-216ENST00000528739 IGKV6D-41A0A0C4DH26 115 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 SLC15A5A6NIM6 579 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 ZNF213O14771 459 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 GJA8P48165 433 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 TRIM32Q13049 653 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 MORN1Q5T089 497 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 MFSD6Q6ZSS7 791 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 U2AF1L4Q8WU68 220 aaKnown RBP16.91■□□□□ 0.3
CAPN1-216ENST00000528739 TRIB2Q92519 343 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 APBA2Q99767 749 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 ANAPC4Q9UJX5 808 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 PPP1R9AQ9ULJ8 1098 aa16.91■□□□□ 0.3
CAPN1-216ENST00000528739 NMT2O60551 498 aa16.9■□□□□ 0.3
CAPN1-216ENST00000528739 ZBED4O75132 1171 aa16.9■□□□□ 0.3
CAPN1-216ENST00000528739 SGPL1O95470 568 aa16.9■□□□□ 0.3
CAPN1-216ENST00000528739 XRCC5P13010 732 aaKnown RBP16.9■□□□□ 0.3
CAPN1-216ENST00000528739 TMEM132BQ14DG7 1078 aa16.9■□□□□ 0.3
CAPN1-216ENST00000528739 CCL14Q16627 93 aa16.9■□□□□ 0.3
CAPN1-216ENST00000528739 MFSD14CQ5VZR4 134 aa16.9■□□□□ 0.3
CAPN1-216ENST00000528739 MKL1Q969V6 931 aa16.9■□□□□ 0.3
CAPN1-216ENST00000528739 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.9■□□□□ 0.3
CAPN1-216ENST00000528739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
CAPN1-216ENST00000528739 VWA5AO00534 786 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 SLC25A27O95847 323 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 BMP3P12645 472 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
CAPN1-216ENST00000528739 STAT3P40763 770 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 SLC1A4P43007 532 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 CPXCR1Q8N123 301 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 PRPF38AQ8NAV1 312 aaKnown RBP16.89■□□□□ 0.29
CAPN1-216ENST00000528739 RUFY2Q8WXA3 655 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 RNF41Q9H4P4 317 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-216ENST00000528739 MROH8Q9H579 483 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 SLC5A4Q9NY91 659 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 FEM1BQ9UK73 627 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 RPTORQ8N122 1335 aa16.89■□□□□ 0.29
CAPN1-216ENST00000528739 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 STRNO43815 780 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 ORC4O43929 436 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 FCER1AP12319 257 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 GSPT1P15170 499 aaKnown RBP16.88■□□□□ 0.29
CAPN1-216ENST00000528739 MCCP23508 829 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 ADORA2AP29274 412 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 CNGA1P29973 690 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 GRB14Q14449 540 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 AKNAD1Q5T1N1 836 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 GMCL1P1Q8NEA9 526 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 SHCBP1Q8NEM2 672 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 MMP19Q99542 508 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 CTNNA3Q9UI47 895 aa16.88■□□□□ 0.29
CAPN1-216ENST00000528739 IMMTQ16891 758 aaKnown RBP16.87■□□□□ 0.29
CAPN1-216ENST00000528739 CCDC96Q2M329 555 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 NPLOC4Q8TAT6 608 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 USP6NLQ92738 828 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 DPF3Q92784 378 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 SHISA4Q96DD7 197 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 SYNPO2Q9UMS6 1093 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 TACC3Q9Y6A5 838 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 PLIN4Q96Q06 1357 aa16.87■□□□□ 0.29
CAPN1-216ENST00000528739 FARP2O94887 1054 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-216ENST00000528739 CACNB2Q08289 660 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-216ENST00000528739 KCTD2Q14681 263 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 SNRNP48Q6IEG0 339 aaKnown RBP16.86■□□□□ 0.29
CAPN1-216ENST00000528739 KCTD1Q719H9 257 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 RIOX2Q8IUF8 465 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 CHURC1Q8WUH1 139 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 STAG1Q8WVM7 1258 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 ESR2Q92731 530 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 DSCC1Q9BVC3 393 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 RAVER2Q9HCJ3 691 aaKnown RBP16.86■□□□□ 0.29
CAPN1-216ENST00000528739 ZMYM6O95789 1325 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 HTTP42858 3142 aa16.86■□□□□ 0.29
CAPN1-216ENST00000528739 CENPFP49454 3210 aa16.85■□□□□ 0.29
CAPN1-216ENST00000528739 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
CAPN1-216ENST00000528739 COPB2P35606 906 aa16.85■□□□□ 0.29
CAPN1-216ENST00000528739 STAT2P52630 851 aa16.85■□□□□ 0.29
CAPN1-216ENST00000528739 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
CAPN1-216ENST00000528739 ZKSCAN3Q9BRR0 538 aa16.85■□□□□ 0.29
CAPN1-216ENST00000528739 TEX13BQ9BXU2 312 aa16.85■□□□□ 0.29
CAPN1-216ENST00000528739 PAK6Q9NQU5 681 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-216ENST00000528739 ADAMTS5Q9UNA0 930 aa16.85■□□□□ 0.29
CAPN1-216ENST00000528739 DOCK3Q8IZD9 2030 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 NEFLP07196 543 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 FGRP09769 529 aa16.84■□□□□ 0.29
CAPN1-216ENST00000528739 CCND3P30281 292 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-216ENST00000528739 CYP2C19P33261 490 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms