RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 DIEXFQ68CQ4 756 aaKnown RBP8.52□□□□□ -1.05
FDFT1-213ENST00000528729 NBPF10Q6P3W6 841 aaKnown RBP8.52□□□□□ -1.05
FDFT1-213ENST00000528729 VHLLQ6RSH7 139 aa8.52□□□□□ -1.05
FDFT1-213ENST00000528729 CHST15Q7LFX5 561 aaPredicted RBP8.52□□□□□ -1.05
FDFT1-213ENST00000528729 SKAP1Q86WV1 359 aa8.52□□□□□ -1.05
FDFT1-213ENST00000528729 CBARPQ8N350 705 aaPredicted RBP8.52□□□□□ -1.05
FDFT1-213ENST00000528729 C1orf127Q8N9H9 656 aa8.52□□□□□ -1.05
FDFT1-213ENST00000528729 CCT6BQ92526 530 aa8.52□□□□□ -1.05
FDFT1-213ENST00000528729 ZNF622Q969S3 477 aaKnown RBP eCLIP8.52□□□□□ -1.053e-19■□□□□ 8.7
FDFT1-213ENST00000528729 GCC1Q96CN9 775 aa8.52□□□□□ -1.05
FDFT1-213ENST00000528729 TMEM87BQ96K49 555 aa8.52□□□□□ -1.05
FDFT1-213ENST00000528729 MYCBPQ99417 103 aaPredicted RBP8.52□□□□□ -1.05
FDFT1-213ENST00000528729 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.05
FDFT1-213ENST00000528729 RAB6BQ9NRW1 208 aa8.52□□□□□ -1.05
FDFT1-213ENST00000528729 LRRFIP2Q9Y608 721 aaKnown RBP8.52□□□□□ -1.05
FDFT1-213ENST00000528729 MAGI3Q5TCQ9 1506 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 AGRPO00253 132 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 ENC1O14682 589 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 KHNYNO15037 678 aaKnown RBP8.51□□□□□ -1.05
FDFT1-213ENST00000528729 CNOT4O95628 575 aaKnown RBP8.51□□□□□ -1.05
FDFT1-213ENST00000528729 LTFP02788 710 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 HNRNPCP07910 306 aaKnown RBP eCLIP8.51□□□□□ -1.05
FDFT1-213ENST00000528729 MYBL2P10244 700 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 PYGMP11217 842 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 GRK6P43250 576 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 PRKG2Q13237 762 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 KIF22Q14807 665 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 TUBB8Q3ZCM7 444 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 ATP13A4Q4VNC1 1196 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 INTS11Q5TA45 600 aaKnown RBP8.51□□□□□ -1.05
FDFT1-213ENST00000528729 NELL1Q92832 810 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 ZFRQ96KR1 1074 aaKnown RBP8.51□□□□□ -1.05
FDFT1-213ENST00000528729 NELL2Q99435 816 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 TRIM39Q9HCM9 518 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 ARHGEF4Q9NR80 690 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 TMPRSS4Q9NRS4 437 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 AFG3L2Q9Y4W6 797 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 HRH3Q9Y5N1 445 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 KIAA0556O60303 1618 aa8.51□□□□□ -1.05
FDFT1-213ENST00000528729 TRAV20A0A0B4J274 112 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 hCG_1642624A0A1W2PR95 340 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 FZD9O00144 591 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 TMCC2O75069 709 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 PRKD3O94806 890 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 ATE1O95260 518 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 RHCEP18577 417 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 VCAM1P19320 739 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 CAPN3P20807 821 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 TM4SF4P48230 202 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 IDH3AP50213 366 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 ARSDP51689 593 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 RHDQ02161 417 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 APBA1Q02410 837 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 TRIM14Q14142 442 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 INAVAQ3KP66 663 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 HEATR6Q6AI08 1181 aaKnown RBP8.5□□□□□ -1.05
FDFT1-213ENST00000528729 FAM180BQ6P0A1 224 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 VASH1Q7L8A9 365 aaPredicted RBP8.5□□□□□ -1.05
FDFT1-213ENST00000528729 SCUBE1Q8IWY4 988 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 TAB3Q8N5C8 712 aaPredicted RBP8.5□□□□□ -1.05
FDFT1-213ENST00000528729 LRCH3Q96II8 777 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 NECAB3Q96P71 396 aaPredicted RBP8.5□□□□□ -1.05
FDFT1-213ENST00000528729 CRTAC1Q9NQ79 661 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 PCDHB14Q9Y5E9 798 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 KCNMB2Q9Y691 235 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 ATP10BO94823 1461 aa8.5□□□□□ -1.05
FDFT1-213ENST00000528729 MEIS3P2A8K0S8 358 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 KPNA6O60684 536 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 EDN3P14138 238 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 USP14P54578 494 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 DHX9Q08211 1270 aaKnown RBP8.49□□□□□ -1.05
FDFT1-213ENST00000528729 WASHC5Q12768 1159 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 LRRFIP1Q32MZ4 808 aaKnown RBP8.49□□□□□ -1.05
FDFT1-213ENST00000528729 PRR16Q569H4 304 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 RC3H1Q5TC82 1133 aaKnown RBP8.49□□□□□ -1.05
FDFT1-213ENST00000528729 LRRC69Q6ZNQ3 347 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 CATIPQ7Z7H3 387 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 SLC41A1Q8IVJ1 513 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 ZSCAN1Q8NBB4 408 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 ZNF784Q8NCA9 323 aaPredicted RBP8.49□□□□□ -1.05
FDFT1-213ENST00000528729 OR2W6PQ8NHA6 318 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 JARID2Q92833 1246 aaPredicted RBP8.49□□□□□ -1.05
FDFT1-213ENST00000528729 TRIM63Q969Q1 353 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 SGCZQ96LD1 299 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 LRGUKQ96M69 825 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 AGBL1Q96MI9 1066 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 SMYD2Q9NRG4 433 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 PDP2Q9P2J9 529 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 GJD2Q9UKL4 321 aa8.49□□□□□ -1.05
FDFT1-213ENST00000528729 RTCBQ9Y3I0 505 aaKnown RBP8.49□□□□□ -1.05
FDFT1-213ENST00000528729 PABPN1LA6NDY0 278 aaKnown RBP8.48□□□□□ -1.05
FDFT1-213ENST00000528729 CLGNO14967 610 aa8.48□□□□□ -1.05
FDFT1-213ENST00000528729 LILRA1O75019 489 aa8.48□□□□□ -1.05
FDFT1-213ENST00000528729 VAMP4O75379 141 aa8.48□□□□□ -1.05
FDFT1-213ENST00000528729 MBD4O95243 580 aa8.48□□□□□ -1.05
FDFT1-213ENST00000528729 ASLP04424 464 aa8.48□□□□□ -1.05
FDFT1-213ENST00000528729 ID4P47928 161 aa8.48□□□□□ -1.05
FDFT1-213ENST00000528729 SUMO1P63165 101 aaKnown RBP8.48□□□□□ -1.05
FDFT1-213ENST00000528729 KRT85P78386 507 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms