RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 CHD1LQ86WJ1 897 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 EVI5LQ96CN4 794 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 PARK7Q99497 189 aaKnown RBP8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 ARID3AQ99856 593 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 WDR18Q9BV38 432 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 DNAJC18Q9H819 358 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 SWAP70Q9UH65 585 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 SLC45A1Q9Y2W3 748 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 SALL3Q9BXA9 1300 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 LOC285556D6RIA3 1793 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 CCDC85CA6NKD9 419 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 USP17L21D6R901 530 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 HOXA2O43364 376 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 GH2P01242 217 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 CHGBP05060 677 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 APPP05067 770 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 NUCB1Q02818 461 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 MOGSQ13724 837 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 RAB3GAP1Q15042 981 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 CSPP1Q1MSJ5 1256 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 GPAT2Q6NUI2 795 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 GIMAP6Q6P9H5 292 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 CCDC84Q86UT8 332 aaPredicted RBP8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 TICAM2Q86XR7 235 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 CD99L2Q8TCZ2 262 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 OSBP2Q969R2 916 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 STRBPQ96SI9 672 aaKnown RBP8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 EFCC1Q9HA90 598 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 TMOD4Q9NZQ9 345 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 ZBTB21Q9ULJ3 1066 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 AGTPBP1Q9UPW5 1226 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 TRIM17Q9Y577 477 aa8.59□□□□□ -1.03
PTP4A2-210ENST00000528253 MYH4Q9Y623 1939 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 CENPFP49454 3210 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 PATL2C9JE40 543 aaKnown RBP8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 USP17L10C9JJH3 530 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 MPHOSPH10O00566 681 aaKnown RBP8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 GPAA1O43292 621 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 NDUFV2P19404 249 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 SHMT1P34896 483 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 HMGCS2P54868 508 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 BACE1P56817 501 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 C12orf60Q5U649 245 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 FBXO46Q6PJ61 603 aaPredicted RBP8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 ADGRD1Q6QNK2 874 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 C17orf99Q6UX52 265 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 OTOP1Q7RTM1 612 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 RILPL2Q969X0 211 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 NACAP1Q9BZK3 213 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 ARPP21Q9UBL0 812 aaPredicted RBP8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 CPA4Q9UI42 421 aa8.58□□□□□ -1.04
PTP4A2-210ENST00000528253 GSG1L2A8MUP6 293 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 MINDY4BA8MYZ0 360 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 LILRB3O75022 631 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 RNF40O75150 1001 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 GNRH1P01148 92 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 FDX1P10109 184 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 CYP2C8P10632 490 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 CYP2D6P10635 497 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 TDO2P48775 406 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 CDK8P49336 464 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 USP14P54578 494 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 JAG1P78504 1218 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 GABPAQ06546 454 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 MTMR2Q13614 643 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 SBK1Q52WX2 424 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 ZMYM1Q5SVZ6 1142 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 CTR9Q6PD62 1173 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 USP17L2Q6R6M4 530 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 SMCR8Q8TEV9 937 aaPredicted RBP8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 KCTD12Q96CX2 325 aaKnown RBP8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 DYNLL2Q96FJ2 89 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 CCDC17Q96LX7 622 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 FEZ1Q99689 392 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 ZNF287Q9HBT7 754 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 PRM3Q9NNZ6 103 aa8.57□□□□□ -1.04
PTP4A2-210ENST00000528253 CYP2D7A0A087X1C5 515 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 M0R2C6 588 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 FMNL1O95466 1100 aaPredicted RBP8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 SLC3A2P08195 630 aaKnown RBP8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 HOXD10P28358 340 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 PSMC4P43686 418 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 GCLCP48506 637 aaPredicted RBP8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 IRX3P78415 501 aaPredicted RBP8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 LACTBP83111 547 aaPredicted RBP8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 SEPT2Q15019 361 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 SHROOM1Q2M3G4 852 aaPredicted RBP8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 TREML2Q5T2D2 321 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 TMEM179Q6ZVK1 233 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 C16orf86Q6ZW13 317 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 IFNL3Q8IZI9 196 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 SEC62Q99442 399 aaKnown RBP8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 MKNK2Q9HBH9 465 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 HELLSQ9NRZ9 838 aa8.56□□□□□ -1.04
PTP4A2-210ENST00000528253 HPS5Q9UPZ3 1129 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms