RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 SPATS2LQ9NUQ6 558 aaKnown RBP13.95□□□□□ -0.18
TSKU-203ENST00000527881 CEP131Q9UPN4 1083 aa13.95□□□□□ -0.18
TSKU-203ENST00000527881 B4E1Z4 1266 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 SLC8A1P32418 973 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 HERVK_113P62684 666 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 TMEM67Q5HYA8 995 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 EMBQ6PCB8 327 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 PEAK1Q9H792 1746 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 EHD2Q9NZN4 543 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 STIM2Q9P246 746 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 TPX2Q9ULW0 747 aaKnown RBP13.94□□□□□ -0.18
TSKU-203ENST00000527881 RFX7Q2KHR2 1363 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 KIF3CO14782 793 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 TACC1O75410 805 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 NT5DC1Q5TFE4 455 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 APOA5Q6Q788 366 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 THOC1Q96FV9 657 aaKnown RBP13.94□□□□□ -0.18
TSKU-203ENST00000527881 DDX21Q9NR30 783 aaKnown RBP eCLIP13.94□□□□□ -0.18
TSKU-203ENST00000527881 NFU1Q9UMS0 254 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 PLEKHG3A1L390 1219 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 RILPL1Q5EBL4 403 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 ARMC2Q8NEN0 867 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 SPATA4Q8NEY3 305 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 MICAL1Q8TDZ2 1067 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 XAGE2Q96GT9 111 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 SLC12A7Q9Y666 1083 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 MLH3Q9UHC1 1453 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 ITIH6Q6UXX5 1313 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
TSKU-203ENST00000527881 ZPR1O75312 459 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 RASSF9O75901 435 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 PAK1Q13153 545 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 HLTFQ14527 1009 aaKnown RBP eCLIP13.93□□□□□ -0.18
TSKU-203ENST00000527881 RRP12Q5JTH9 1297 aaKnown RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 PNMA8AQ86V59 439 aaPredicted RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 RASSF8Q8NHQ8 419 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 RBM33Q96EV2 1170 aaKnown RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 CALR3Q96L12 384 aaKnown RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 UBAC1Q9BSL1 405 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 ACTR5Q9H9F9 607 aaPredicted RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 KIF9Q9HAQ2 790 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 SENP2Q9HC62 589 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 VPS54Q9P1Q0 977 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 MAGEC2Q9UBF1 373 aaPredicted RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 TMEM131LA2VDJ0 1609 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 MDH1P40925 334 aaKnown RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 CUL4BQ13620 913 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 PPP1R7Q15435 360 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 FUKQ8N0W3 1084 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 PAGE5Q96GU1 130 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 OPLAHO14841 1288 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 USO1O60763 962 aaKnown RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 MRPL12P52815 198 aaKnown RBP13.93□□□□□ -0.18
TSKU-203ENST00000527881 CYFIP2Q96F07 1278 aa13.93□□□□□ -0.18
TSKU-203ENST00000527881 ENO4A6NNW6 628 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 FAM107AO95990 144 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 GUCY2DQ02846 1103 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 TCP11X2Q5H9J9 407 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 WLSQ5T9L3 541 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 CPLX4Q7Z7G2 160 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 ATXN2Q99700 1313 aaKnown RBP13.92□□□□□ -0.18
TSKU-203ENST00000527881 MYH8P13535 1937 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 TOB1P50616 345 aaPredicted RBP13.92□□□□□ -0.18
TSKU-203ENST00000527881 RNASE9P60153 205 aaKnown RBP13.92□□□□□ -0.18
TSKU-203ENST00000527881 SLC39A6Q13433 755 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 PLCB4Q15147 1175 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 HIBCHQ6NVY1 386 aaPredicted RBP13.92□□□□□ -0.18
TSKU-203ENST00000527881 NFRKBQ6P4R8 1299 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 KDM7AQ6ZMT4 941 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 YTHDF3Q7Z739 585 aaKnown RBP13.92□□□□□ -0.18
TSKU-203ENST00000527881 NUP133Q8WUM0 1156 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 WASF1Q92558 559 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 CCDC42Q96M95 316 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 EPB41L5Q9HCM4 733 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 UBN2Q6ZU65 1347 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
TSKU-203ENST00000527881 SEMA3EO15041 775 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 IFT20Q8IY31 132 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 TCP11Q8WWU5 503 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 LRWD1Q9UFC0 647 aa13.92□□□□□ -0.18
TSKU-203ENST00000527881 RCCD1A6NED2 376 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 PPP1R3GB7ZBB8 358 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 CLTAP09496 248 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 CACNA2D3Q8IZS8 1091 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 SYMPKQ92797 1274 aaKnown RBP13.91□□□□□ -0.18
TSKU-203ENST00000527881 GSDMAQ96QA5 445 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 SPATA31D1Q6ZQQ2 1576 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 TRIM75PA6NK02 468 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 DPYDQ12882 1025 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
TSKU-203ENST00000527881 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 ARFGAP2Q8N6H7 521 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 ANKRD13CQ8N6S4 541 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 ZNF526Q8TF50 670 aaPredicted RBP13.91□□□□□ -0.18
TSKU-203ENST00000527881 CPSF2Q9P2I0 782 aaKnown RBP13.91□□□□□ -0.18
TSKU-203ENST00000527881 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
TSKU-203ENST00000527881 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms