RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 COL11A1P12107 1806 aaPredicted RBP24.99■■□□□ 1.59
PKP3-205ENST00000527442 GABPAQ06546 454 aa24.99■■□□□ 1.59
PKP3-205ENST00000527442 MAP3K12Q12852 859 aa24.99■■□□□ 1.59
PKP3-205ENST00000527442 SHHQ15465 462 aa24.99■■□□□ 1.59
PKP3-205ENST00000527442 OLFML2BQ68BL8 750 aa24.99■■□□□ 1.59
PKP3-205ENST00000527442 ZNFX1Q9P2E3 1918 aaKnown RBP24.99■■□□□ 1.59
PKP3-205ENST00000527442 EYSQ5T1H1 3165 aa24.99■■□□□ 1.59
PKP3-205ENST00000527442 C9orf50Q5SZB4 431 aa24.98■■□□□ 1.59
PKP3-205ENST00000527442 ZSCAN25Q6NSZ9 544 aa24.98■■□□□ 1.59
PKP3-205ENST00000527442 TMED8Q6PL24 325 aaPredicted RBP24.98■■□□□ 1.59
PKP3-205ENST00000527442 SLC39A5Q6ZMH5 540 aa24.98■■□□□ 1.59
PKP3-205ENST00000527442 ARRDC4Q8NCT1 418 aa24.98■■□□□ 1.59
PKP3-205ENST00000527442 TANGO6Q9C0B7 1094 aa24.98■■□□□ 1.59
PKP3-205ENST00000527442 SPATC1LQ9H0A9 340 aa24.98■■□□□ 1.59
PKP3-205ENST00000527442 DIAPH3Q9NSV4 1193 aa24.98■■□□□ 1.59
PKP3-205ENST00000527442 RAD50Q92878 1312 aa24.97■■□□□ 1.59
PKP3-205ENST00000527442 KBTBD13C9JR72 458 aa24.97■■□□□ 1.59
PKP3-205ENST00000527442 POLR3DP05423 398 aaPredicted RBP24.97■■□□□ 1.59
PKP3-205ENST00000527442 COG2Q14746 738 aa24.97■■□□□ 1.59
PKP3-205ENST00000527442 TRIM60Q495X7 471 aa24.97■■□□□ 1.59
PKP3-205ENST00000527442 BACH2Q9BYV9 841 aa24.97■■□□□ 1.59
PKP3-205ENST00000527442 PRDM5Q9NQX1 630 aaPredicted RBP24.97■■□□□ 1.59
PKP3-205ENST00000527442 MPHOSPH10O00566 681 aaKnown RBP24.96■■□□□ 1.59
PKP3-205ENST00000527442 SEPT4O43236 478 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 STRNO43815 780 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 COBLO75128 1261 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 ERCC3P19447 782 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 ADD2P35612 726 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 SNX17Q15036 470 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 KIAA1755Q5JYT7 1200 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 SHCBP1Q8NEM2 672 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 PLXNA1Q9UIW2 1896 aa24.96■■□□□ 1.59
PKP3-205ENST00000527442 BAZ2AQ9UIF9 1905 aaKnown RBP24.95■■□□□ 1.58
PKP3-205ENST00000527442 MAGEB6P1A0A0J9YX57 407 aa24.95■■□□□ 1.58
PKP3-205ENST00000527442 RNF113AO15541 343 aaKnown RBP24.95■■□□□ 1.58
PKP3-205ENST00000527442 MYCNP04198 464 aaPredicted RBP24.95■■□□□ 1.58
PKP3-205ENST00000527442 UBE3CQ15386 1083 aa24.95■■□□□ 1.58
PKP3-205ENST00000527442 PRAMEF19Q5SWL8 479 aa24.95■■□□□ 1.58
PKP3-205ENST00000527442 BADQ92934 168 aa24.95■■□□□ 1.58
PKP3-205ENST00000527442 CDX2Q99626 313 aaPredicted RBP24.95■■□□□ 1.58
PKP3-205ENST00000527442 PDLIM7Q9NR12 457 aa24.95■■□□□ 1.58
PKP3-205ENST00000527442 HOXC10Q9NYD6 342 aa24.95■■□□□ 1.58
PKP3-205ENST00000527442 SMCHD1A6NHR9 2005 aa24.95■■□□□ 1.58
PKP3-205ENST00000527442 EIF5BO60841 1220 aaKnown RBP24.94■■□□□ 1.58
PKP3-205ENST00000527442 PDE6AP16499 860 aa24.94■■□□□ 1.58
PKP3-205ENST00000527442 NMIQ13287 307 aaPredicted RBP24.94■■□□□ 1.58
PKP3-205ENST00000527442 ZMYM1Q5SVZ6 1142 aa24.94■■□□□ 1.58
PKP3-205ENST00000527442 RUFY2Q8WXA3 655 aa24.94■■□□□ 1.58
PKP3-205ENST00000527442 ESYT1Q9BSJ8 1104 aa24.94■■□□□ 1.58
PKP3-205ENST00000527442 MCM9Q9NXL9 1143 aa24.94■■□□□ 1.58
PKP3-205ENST00000527442 A0A0D9SFI3 127 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 TCRBV5S4A2TA0A5A2 114 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 ADCYAP1R1P41586 468 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 SLC9C2Q5TAH2 1124 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 SH3RF1Q7Z6J0 888 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 CLEC10AQ8IUN9 316 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 SLC44A5Q8NCS7 719 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 APPBP2Q92624 585 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 FERMT2Q96AC1 680 aa24.93■■□□□ 1.58
PKP3-205ENST00000527442 CRNKL1Q9BZJ0 848 aaKnown RBP24.93■■□□□ 1.58
PKP3-205ENST00000527442 SGSM2O43147 1006 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 CYP2D6P10635 497 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 DSG3P32926 999 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 PLS1Q14651 629 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 LRRC41Q15345 812 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 FAM47AQ5JRC9 791 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 SDR42E1Q8WUS8 393 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 ATG4CQ96DT6 458 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 FAM227BQ96M60 508 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 SEMA6BQ9H3T3 888 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 HELLSQ9NRZ9 838 aa24.92■■□□□ 1.58
PKP3-205ENST00000527442 ZNF532Q9HCE3 1301 aa24.91■■□□□ 1.58
PKP3-205ENST00000527442 TRIM43BA6NCK2 446 aa24.91■■□□□ 1.58
PKP3-205ENST00000527442 CHGBP05060 677 aa24.91■■□□□ 1.58
PKP3-205ENST00000527442 CWC27Q6UX04 472 aaKnown RBP24.91■■□□□ 1.58
PKP3-205ENST00000527442 NCAPG2Q86XI2 1143 aa24.91■■□□□ 1.58
PKP3-205ENST00000527442 MB21D1Q8N884 522 aa24.91■■□□□ 1.58
PKP3-205ENST00000527442 MAFAQ8NHW3 353 aaPredicted RBP24.91■■□□□ 1.58
PKP3-205ENST00000527442 TRIM43Q96BQ3 446 aaPredicted RBP24.91■■□□□ 1.58
PKP3-205ENST00000527442 MAML3Q96JK9 1138 aa24.91■■□□□ 1.58
PKP3-205ENST00000527442 TTYH1Q9H313 450 aaPredicted RBP24.91■■□□□ 1.58
PKP3-205ENST00000527442 MROH8Q9H579 483 aa24.91■■□□□ 1.58
PKP3-205ENST00000527442 TMEM179Q6ZVK1 233 aa24.9■■□□□ 1.58
PKP3-205ENST00000527442 ABRAQ8N0Z2 381 aa24.9■■□□□ 1.58
PKP3-205ENST00000527442 MYLIPQ8WY64 445 aa24.9■■□□□ 1.58
PKP3-205ENST00000527442 IL25Q9H293 177 aa24.9■■□□□ 1.58
PKP3-205ENST00000527442 SLC5A4Q9NY91 659 aa24.9■■□□□ 1.58
PKP3-205ENST00000527442 VCANP13611 3396 aa24.9■■□□□ 1.58
PKP3-205ENST00000527442 FLOT1O75955 427 aa24.89■■□□□ 1.58
PKP3-205ENST00000527442 SMAD3P84022 425 aaKnown RBP24.89■■□□□ 1.58
PKP3-205ENST00000527442 SIAH1Q8IUQ4 282 aa24.89■■□□□ 1.58
PKP3-205ENST00000527442 SPICE1Q8N0Z3 855 aa24.89■■□□□ 1.58
PKP3-205ENST00000527442 LCORLQ8N3X6 602 aa24.89■■□□□ 1.58
PKP3-205ENST00000527442 DYNLL2Q96FJ2 89 aa24.89■■□□□ 1.58
PKP3-205ENST00000527442 DCP1AQ9NPI6 582 aaPredicted RBP24.89■■□□□ 1.58
PKP3-205ENST00000527442 PRUNE2Q8WUY3 3088 aa24.89■■□□□ 1.57
PKP3-205ENST00000527442 CDH23Q9H251 3354 aa24.88■■□□□ 1.57
PKP3-205ENST00000527442 TLE2Q04725 743 aa24.88■■□□□ 1.57
PKP3-205ENST00000527442 MCMDC2Q4G0Z9 681 aa24.88■■□□□ 1.57
PKP3-205ENST00000527442 C1orf53Q5VUE5 145 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms