RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 WDR78Q5VTH9 848 aa22.75■■□□□ 1.23
PKP3-204ENST00000526971 LBX2Q6XYB7 198 aa22.75■■□□□ 1.23
PKP3-204ENST00000526971 NPLOC4Q8TAT6 608 aa22.75■■□□□ 1.23
PKP3-204ENST00000526971 MPHOSPH10O00566 681 aaKnown RBP22.74■■□□□ 1.23
PKP3-204ENST00000526971 CCNA1P78396 465 aa22.74■■□□□ 1.23
PKP3-204ENST00000526971 SEPT2Q15019 361 aa22.74■■□□□ 1.23
PKP3-204ENST00000526971 TTC22Q5TAA0 569 aa22.74■■□□□ 1.23
PKP3-204ENST00000526971 CCDC17Q96LX7 622 aa22.74■■□□□ 1.23
PKP3-204ENST00000526971 UBE2OQ9C0C9 1292 aaKnown RBP22.74■■□□□ 1.23
PKP3-204ENST00000526971 RPAP3Q9H6T3 665 aaPredicted RBP22.74■■□□□ 1.23
PKP3-204ENST00000526971 CWC22Q9HCG8 908 aaKnown RBP22.74■■□□□ 1.23
PKP3-204ENST00000526971 A0A1W2PRG0 241 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 SLC15A5A6NIM6 579 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 FOXP2O15409 715 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 GRB14Q14449 540 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 GPR153Q6NV75 609 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 TMEM179Q6ZVK1 233 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 DEFB123Q8N688 67 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 TRPV1Q8NER1 839 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 NAPBQ9H115 298 aa22.73■■□□□ 1.23
PKP3-204ENST00000526971 ZNFX1Q9P2E3 1918 aaKnown RBP22.72■■□□□ 1.23
PKP3-204ENST00000526971 IGHA2P01877 340 aa22.72■■□□□ 1.23
PKP3-204ENST00000526971 HOXC6P09630 235 aa22.72■■□□□ 1.23
PKP3-204ENST00000526971 AKR1B1P15121 316 aa22.72■■□□□ 1.23
PKP3-204ENST00000526971 GSPT1P15170 499 aaKnown RBP22.72■■□□□ 1.23
PKP3-204ENST00000526971 MDM2Q00987 491 aaPredicted RBP22.72■■□□□ 1.23
PKP3-204ENST00000526971 VPS53Q5VIR6 699 aa22.72■■□□□ 1.23
PKP3-204ENST00000526971 CENPQQ7L2Z9 268 aaPredicted RBP22.72■■□□□ 1.23
PKP3-204ENST00000526971 COL11A1P12107 1806 aaPredicted RBP22.72■■□□□ 1.23
PKP3-204ENST00000526971 MYH7P12883 1935 aa22.72■■□□□ 1.23
PKP3-204ENST00000526971 ROBO3Q96MS0 1386 aa22.72■■□□□ 1.23
PKP3-204ENST00000526971 HIP1O00291 1037 aa22.71■■□□□ 1.23
PKP3-204ENST00000526971 CYP2C19P33261 490 aa22.71■■□□□ 1.23
PKP3-204ENST00000526971 MFSD14CQ5VZR4 134 aa22.71■■□□□ 1.23
PKP3-204ENST00000526971 DDX20Q9UHI6 824 aaKnown RBP22.71■■□□□ 1.23
PKP3-204ENST00000526971 DLL1O00548 723 aa22.7■■□□□ 1.22
PKP3-204ENST00000526971 KIAA1755Q5JYT7 1200 aa22.7■■□□□ 1.22
PKP3-204ENST00000526971 ZNF589Q86UQ0 364 aaPredicted RBP22.7■■□□□ 1.22
PKP3-204ENST00000526971 STK11IPQ8N1F8 1099 aa22.7■■□□□ 1.22
PKP3-204ENST00000526971 MKNK2Q9HBH9 465 aa22.7■■□□□ 1.22
PKP3-204ENST00000526971 DIAPH3Q9NSV4 1193 aa22.7■■□□□ 1.22
PKP3-204ENST00000526971 NEFLP07196 543 aa22.69■■□□□ 1.22
PKP3-204ENST00000526971 CENPBP07199 599 aaPredicted RBP22.69■■□□□ 1.22
PKP3-204ENST00000526971 ALX1Q15699 326 aa22.69■■□□□ 1.22
PKP3-204ENST00000526971 CLEC10AQ8IUN9 316 aa22.69■■□□□ 1.22
PKP3-204ENST00000526971 MOV10L1Q9BXT6 1211 aaKnown RBP22.69■■□□□ 1.22
PKP3-204ENST00000526971 SENP6Q9GZR1 1112 aaPredicted RBP22.69■■□□□ 1.22
PKP3-204ENST00000526971 ZNF287Q9HBT7 754 aa22.69■■□□□ 1.22
PKP3-204ENST00000526971 MTMR10Q9NXD2 777 aa22.69■■□□□ 1.22
PKP3-204ENST00000526971 UNC80Q8N2C7 3258 aa22.69■■□□□ 1.22
PKP3-204ENST00000526971 CCDC171Q6TFL3 1326 aa22.68■■□□□ 1.22
PKP3-204ENST00000526971 CYBAP13498 195 aa22.68■■□□□ 1.22
PKP3-204ENST00000526971 RASA1P20936 1047 aa22.68■■□□□ 1.22
PKP3-204ENST00000526971 PPARAQ07869 468 aa22.68■■□□□ 1.22
PKP3-204ENST00000526971 CWC27Q6UX04 472 aaKnown RBP22.68■■□□□ 1.22
PKP3-204ENST00000526971 SIAH1Q8IUQ4 282 aa22.68■■□□□ 1.22
PKP3-204ENST00000526971 IVNS1ABPQ9Y6Y0 642 aa22.68■■□□□ 1.22
PKP3-204ENST00000526971 SMCHD1A6NHR9 2005 aa22.68■■□□□ 1.22
PKP3-204ENST00000526971 SLC3A2P08195 630 aaKnown RBP22.67■■□□□ 1.22
PKP3-204ENST00000526971 HSPD1P10809 573 aaKnown RBP22.67■■□□□ 1.22
PKP3-204ENST00000526971 CNGA1P29973 690 aa22.67■■□□□ 1.22
PKP3-204ENST00000526971 MFAP1P55081 439 aaKnown RBP22.67■■□□□ 1.22
PKP3-204ENST00000526971 ATP2B2Q01814 1243 aa22.67■■□□□ 1.22
PKP3-204ENST00000526971 LPAR1Q92633 364 aa22.67■■□□□ 1.22
PKP3-204ENST00000526971 PLXNA1Q9UIW2 1896 aa22.66■■□□□ 1.22
PKP3-204ENST00000526971 ADORA2AP29274 412 aa22.66■■□□□ 1.22
PKP3-204ENST00000526971 ATN1P54259 1190 aaPredicted RBP22.66■■□□□ 1.22
PKP3-204ENST00000526971 ICA1Q05084 483 aa22.66■■□□□ 1.22
PKP3-204ENST00000526971 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.66■■□□□ 1.22
PKP3-204ENST00000526971 TANGO6Q9C0B7 1094 aa22.66■■□□□ 1.22
PKP3-204ENST00000526971 KANSL2Q9H9L4 492 aa22.66■■□□□ 1.22
PKP3-204ENST00000526971 PRDM1O75626 825 aa22.65■■□□□ 1.22
PKP3-204ENST00000526971 FGAP02671 866 aa22.65■■□□□ 1.22
PKP3-204ENST00000526971 PDE4BQ07343 736 aa22.65■■□□□ 1.22
PKP3-204ENST00000526971 ZNF444Q8N0Y2 327 aaPredicted RBP22.65■■□□□ 1.22
PKP3-204ENST00000526971 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
PKP3-204ENST00000526971 SPATC1LQ9H0A9 340 aa22.65■■□□□ 1.22
PKP3-204ENST00000526971 ARHGEF10LQ9HCE6 1279 aa22.65■■□□□ 1.22
PKP3-204ENST00000526971 ANAPC4Q9UJX5 808 aa22.65■■□□□ 1.22
PKP3-204ENST00000526971 STXBP5LQ9Y2K9 1186 aa22.65■■□□□ 1.22
PKP3-204ENST00000526971 DNM1LO00429 736 aa22.64■■□□□ 1.21
PKP3-204ENST00000526971 MSCO60682 206 aa22.64■■□□□ 1.21
PKP3-204ENST00000526971 COBLO75128 1261 aa22.64■■□□□ 1.21
PKP3-204ENST00000526971 COG2Q14746 738 aa22.64■■□□□ 1.21
PKP3-204ENST00000526971 ANO1Q5XXA6 986 aa22.64■■□□□ 1.21
PKP3-204ENST00000526971 TMX2Q9Y320 296 aa22.64■■□□□ 1.21
PKP3-204ENST00000526971 ZMYM6O95789 1325 aa22.63■■□□□ 1.21
PKP3-204ENST00000526971 EEF2P13639 858 aaKnown RBP22.63■■□□□ 1.21
PKP3-204ENST00000526971 ERCC3P19447 782 aa22.63■■□□□ 1.21
PKP3-204ENST00000526971 RTP1P59025 263 aa22.63■■□□□ 1.21
PKP3-204ENST00000526971 GJC2Q5T442 439 aaPredicted RBP22.63■■□□□ 1.21
PKP3-204ENST00000526971 OLFML2BQ68BL8 750 aa22.63■■□□□ 1.21
PKP3-204ENST00000526971 SH2D4AQ9H788 454 aa22.63■■□□□ 1.21
PKP3-204ENST00000526971 CTDSPL2Q05D32 466 aa22.62■■□□□ 1.21
PKP3-204ENST00000526971 DPP9Q86TI2 863 aa22.62■■□□□ 1.21
PKP3-204ENST00000526971 SHCBP1Q8NEM2 672 aa22.62■■□□□ 1.21
PKP3-204ENST00000526971 ATG4CQ96DT6 458 aa22.62■■□□□ 1.21
PKP3-204ENST00000526971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.62■■□□□ 1.21
PKP3-204ENST00000526971 GREB1LQ9C091 1923 aaPredicted RBP22.62■■□□□ 1.21
PKP3-204ENST00000526971 DSG3P32926 999 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms