RNA–Protein interactions for RNA: ENST00000526772.5

CTNND1-214, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-214ENST00000526772 IFT140Q96RY7 1462 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 CYTH3O43739 400 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 DEAF1O75398 565 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SERPINB3P29508 390 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 MECOMQ03112 1051 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 LRMPQ12912 555 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 MCF2L2Q86YR7 1114 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 DACT3Q96B18 629 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SEPT3Q9UH03 358 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SPG7Q9UQ90 795 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SAR1BQ9Y6B6 198 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 GRIN2BQ13224 1484 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 GOLGA8IPA6NC78 632 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 TSPY2A6NKD2 308 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 PSMA7O14818 248 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 IKBKBO14920 756 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 XPOTO43592 962 aaKnown RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 TSPY3P0CV98 308 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 TSPY8P0CW00 308 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 TSPY1Q01534 308 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 PPP2R5EQ16537 467 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 CCDC153Q494R4 210 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 NUGGCQ68CJ6 796 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SIX5Q8N196 739 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 JPH4Q96JJ6 628 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 RAB34Q9BZG1 259 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 CARD9Q9H257 536 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 DDX28Q9NUL7 540 aaKnown RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 CCDC87Q9NVE4 849 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 FGFR1OP2Q9NVK5 253 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 CHMP2BQ9UQN3 213 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 MX2P20592 715 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 STX2P32856 288 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 IARSP41252 1262 aaKnown RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 TMEM154Q6P9G4 183 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 KIF6Q6ZMV9 814 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 TBC1D1Q86TI0 1168 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 STX12Q86Y82 276 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 RHPN1Q8TCX5 695 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 LRRC8CQ8TDW0 803 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 XPO4Q9C0E2 1151 aaKnown RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 TRPC6Q9Y210 931 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 UTP11Q9Y3A2 253 aaKnown RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 ZFYVE9O95405 1425 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 PTPRGP23470 1445 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 RGS16O15492 202 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 APOA1P02647 267 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 FOSL1P15407 271 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 DNA2P51530 1060 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SMTNP53814 917 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 HDAC4P56524 1084 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 HORMAD1Q86X24 394 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 NECAB1Q8N987 351 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SNRNP27Q8WVK2 155 aaKnown RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 MTRQ99707 1265 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SENP3Q9H4L4 574 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-214ENST00000526772 HAUS4Q9H6D7 363 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 SEL1LQ9UBV2 794 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 PARP2Q9UGN5 583 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 HDAC9Q9UKV0 1011 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 ADGRL1O94910 1474 aa7.2□□□□□ -1.26
CTNND1-214ENST00000526772 NBPF26B4DH59 902 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 ECM2O94769 699 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 CTNNA1P35221 906 aaKnown RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 TRPC1P48995 793 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 KRT76Q01546 638 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 CDC37Q16543 378 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 DAB2IPQ5VWQ8 1189 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 NBPF15Q8N660 670 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 VPS37AQ8NEZ2 397 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 ST13P5Q8NFI4 369 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 WDR60Q8WVS4 1066 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 TSPAN18Q96SJ8 248 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 RPAP3Q9H6T3 665 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 TMEM165Q9HC07 324 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 KRT82Q9NSB4 513 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 DNAJC17Q9NVM6 304 aaKnown RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 ZMYND8Q9ULU4 1186 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 CCDC169A6NNP5 214 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 TADA3O75528 432 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 POLR2EP19388 210 aaKnown RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 CFAP221Q4G0U5 840 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 BICDL1Q6ZP65 573 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 ATP6V1E2Q96A05 226 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 SKA1Q96BD8 255 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 TRIM47Q96LD4 638 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 RABL2AQ9UBK7 228 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 IQSEC3Q9UPP2 1182 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 KIF21AQ7Z4S6 1674 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 TFAP4Q01664 338 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 RRAGBQ5VZM2 374 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 ABCA10Q8WWZ4 1543 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 CUL5Q93034 780 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 LRRC59Q96AG4 307 aaKnown RBP7.19□□□□□ -1.26
CTNND1-214ENST00000526772 DYDC2Q96IM9 177 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 PLEKHA4Q9H4M7 779 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 VIPAS39Q9H9C1 493 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 ZNF521Q96K83 1311 aa7.19□□□□□ -1.26
CTNND1-214ENST00000526772 A0A087WZG4 1122 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms