RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 MTMR10Q9NXD2 777 aa14.12□□□□□ -0.15
CAPN1-204ENST00000526468 STXBP5LQ9Y2K9 1186 aa14.12□□□□□ -0.15
CAPN1-204ENST00000526468 COG6Q9Y2V7 657 aa14.12□□□□□ -0.15
CAPN1-204ENST00000526468 ROBO3Q96MS0 1386 aa14.11□□□□□ -0.15
CAPN1-204ENST00000526468 A0A0C4DFX4 3053 aa14.11□□□□□ -0.15
CAPN1-204ENST00000526468 SEPT4O43236 478 aa14.11□□□□□ -0.15
CAPN1-204ENST00000526468 STRNO43815 780 aa14.11□□□□□ -0.15
CAPN1-204ENST00000526468 DSG3P32926 999 aa14.11□□□□□ -0.15
CAPN1-204ENST00000526468 FAM47AQ5JRC9 791 aa14.11□□□□□ -0.15
CAPN1-204ENST00000526468 RPAP2Q8IXW5 612 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-204ENST00000526468 ARRDC4Q8NCT1 418 aa14.11□□□□□ -0.15
CAPN1-204ENST00000526468 COBLO75128 1261 aa14.1□□□□□ -0.15
CAPN1-204ENST00000526468 RAB11FIP3O75154 756 aa14.1□□□□□ -0.15
CAPN1-204ENST00000526468 FCER1AP12319 257 aa14.1□□□□□ -0.15
CAPN1-204ENST00000526468 TRIM60Q495X7 471 aa14.1□□□□□ -0.15
CAPN1-204ENST00000526468 MAML3Q96JK9 1138 aa14.1□□□□□ -0.15
CAPN1-204ENST00000526468 ATP8A2Q9NTI2 1148 aa14.1□□□□□ -0.15
CAPN1-204ENST00000526468 TMX2Q9Y320 296 aa14.1□□□□□ -0.15
CAPN1-204ENST00000526468 SMIM22K7EJ46 135 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 IGHA2P01877 340 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 CHGBP05060 677 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 CDK8P49336 464 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 C16orf86Q6ZW13 317 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 SIRT2Q8IXJ6 389 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 ABRAQ8N0Z2 381 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 CCDC17Q96LX7 622 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 FAM161BQ96MY7 647 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 MMP19Q99542 508 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 HAUS7Q99871 368 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 GOPCQ9HD26 462 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 SLC4A4Q9Y6R1 1079 aa14.09□□□□□ -0.15
CAPN1-204ENST00000526468 EYSQ5T1H1 3165 aa14.08□□□□□ -0.15
CAPN1-204ENST00000526468 USP17L12C9JPN9 530 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 USP17L21D6R901 530 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.16
CAPN1-204ENST00000526468 ATP5JP18859 108 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 KCTD2Q14681 263 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 TMEM132BQ14DG7 1078 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 PRAMEF19Q5SWL8 479 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 FAM83BQ5T0W9 1011 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 ZNF697Q5TEC3 545 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 C12orf60Q5U649 245 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 FERMT2Q96AC1 680 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 XPNPEP3Q9NQH7 507 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 PDLIM7Q9NR12 457 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 FBXO28Q9NVF7 368 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 ARPP21Q9UBL0 812 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-204ENST00000526468 TTC28Q96AY4 2481 aa14.08□□□□□ -0.16
CAPN1-204ENST00000526468 SLC25A27O95847 323 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 PGK2P07205 417 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 RARBP10826 455 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 ADCYAP1R1P41586 468 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 SNX17Q15036 470 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 LRRC41Q15345 812 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 UBE3CQ15386 1083 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 ZSCAN25Q6NSZ9 544 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 SLC39A5Q6ZMH5 540 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 LENG1Q96BZ8 264 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-204ENST00000526468 GUCD1Q96NT3 240 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 ZBTB40Q9NUA8 1239 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 PPP1R9AQ9ULJ8 1098 aa14.07□□□□□ -0.16
CAPN1-204ENST00000526468 NCOR1O75376 2440 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 COPB2P35606 906 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 RIOX2Q8IUF8 465 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 SIAH1Q8IUQ4 282 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 STK11IPQ8N1F8 1099 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 LRRCC1Q9C099 1032 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 CHMP4BQ9H444 224 aaKnown RBP14.06□□□□□ -0.16
CAPN1-204ENST00000526468 KANSL2Q9H9L4 492 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 LAMA4Q16363 1823 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 TANC1Q9C0D5 1861 aa14.06□□□□□ -0.16
CAPN1-204ENST00000526468 VWA5AO00534 786 aa14.05□□□□□ -0.16
CAPN1-204ENST00000526468 SMARCA5O60264 1052 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-204ENST00000526468 C9orf50Q5SZB4 431 aa14.05□□□□□ -0.16
CAPN1-204ENST00000526468 CTR9Q6PD62 1173 aa14.05□□□□□ -0.16
CAPN1-204ENST00000526468 BADQ92934 168 aa14.05□□□□□ -0.16
CAPN1-204ENST00000526468 NUP88Q99567 741 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-204ENST00000526468 SLF1Q9BQI6 1058 aa14.05□□□□□ -0.16
CAPN1-204ENST00000526468 PUS7LQ9H0K6 701 aaKnown RBP14.05□□□□□ -0.16
CAPN1-204ENST00000526468 ZNF214Q9UL59 606 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-204ENST00000526468 PHF24Q9UPV7 400 aa14.05□□□□□ -0.16
CAPN1-204ENST00000526468 CNPY2Q9Y2B0 182 aa14.05□□□□□ -0.16
CAPN1-204ENST00000526468 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
CAPN1-204ENST00000526468 PGK1P00558 417 aa14.04□□□□□ -0.16
CAPN1-204ENST00000526468 STAT3P40763 770 aa14.04□□□□□ -0.16
CAPN1-204ENST00000526468 SHHQ15465 462 aa14.04□□□□□ -0.16
CAPN1-204ENST00000526468 FAM109BQ6ICB4 259 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-204ENST00000526468 SNRNP48Q6IEG0 339 aaKnown RBP14.04□□□□□ -0.16
CAPN1-204ENST00000526468 RNF180Q86T96 592 aa14.04□□□□□ -0.16
CAPN1-204ENST00000526468 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN1-204ENST00000526468 TINF2Q9BSI4 451 aa14.04□□□□□ -0.16
CAPN1-204ENST00000526468 NRBP1Q9UHY1 535 aa14.04□□□□□ -0.16
CAPN1-204ENST00000526468 PRUNE2Q8WUY3 3088 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 A0A1W2PQ45 241 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-204ENST00000526468 A0A1W2PQY0 241 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 CLTBP09497 229 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 AKR1A1P14550 325 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 TLE2Q04725 743 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 SH3RF1Q7Z6J0 888 aa14.03□□□□□ -0.16
CAPN1-204ENST00000526468 REPS2Q8NFH8 660 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms