RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 PPARAQ07869 468 aa13.85□□□□□ -0.19
HIF3A-209ENST00000525854 FAM83BQ5T0W9 1011 aa13.85□□□□□ -0.19
HIF3A-209ENST00000525854 NCAPG2Q86XI2 1143 aa13.85□□□□□ -0.19
HIF3A-209ENST00000525854 ABRAQ8N0Z2 381 aa13.85□□□□□ -0.19
HIF3A-209ENST00000525854 CLIP2Q9UDT6 1046 aa13.85□□□□□ -0.19
HIF3A-209ENST00000525854 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
HIF3A-209ENST00000525854 SYNPO2Q9UMS6 1093 aa13.85□□□□□ -0.19
HIF3A-209ENST00000525854 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
HIF3A-209ENST00000525854 F5H6K3 240 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 VWA5AO00534 786 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 MSCO60682 206 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 FCER1AP12319 257 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 CCND3P30281 292 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-209ENST00000525854 KLRC3Q07444 240 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 TMEM132BQ14DG7 1078 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 PPP4R3BQ5MIZ7 849 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 OLFML2BQ68BL8 750 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 SMC5Q8IY18 1101 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 NPLOC4Q8TAT6 608 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 DIS3LQ8TF46 1054 aaKnown RBP13.84□□□□□ -0.19
HIF3A-209ENST00000525854 SLF1Q9BQI6 1058 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 HELLSQ9NRZ9 838 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 MTMR4Q9NYA4 1195 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 FLRT1Q9NZU1 646 aa13.84□□□□□ -0.19
HIF3A-209ENST00000525854 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-209ENST00000525854 IGKV6D-41A0A0C4DH26 115 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 TTLL1O95922 423 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 NDUFB10O96000 172 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 STAT3P40763 770 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 RIOX2Q8IUF8 465 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 NEDD1Q8NHV4 660 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 MKL1Q969V6 931 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 CEP95Q96GE4 821 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 C11orf49Q9H6J7 331 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 PLIN4Q96Q06 1357 aa13.83□□□□□ -0.2
HIF3A-209ENST00000525854 CNGA1P29973 690 aa13.82□□□□□ -0.2
HIF3A-209ENST00000525854 CYP2C19P33261 490 aa13.82□□□□□ -0.2
HIF3A-209ENST00000525854 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-209ENST00000525854 TFAP4Q01664 338 aa13.82□□□□□ -0.2
HIF3A-209ENST00000525854 KCTD2Q14681 263 aa13.82□□□□□ -0.2
HIF3A-209ENST00000525854 LHX8Q68G74 356 aa13.82□□□□□ -0.2
HIF3A-209ENST00000525854 CCDC129Q6ZRS4 1044 aa13.82□□□□□ -0.2
HIF3A-209ENST00000525854 PRPF38AQ8NAV1 312 aaKnown RBP13.82□□□□□ -0.2
HIF3A-209ENST00000525854 GMCL1P1Q8NEA9 526 aa13.82□□□□□ -0.2
HIF3A-209ENST00000525854 NUP88Q99567 741 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-209ENST00000525854 DDX20Q9UHI6 824 aaKnown RBP13.82□□□□□ -0.2
HIF3A-209ENST00000525854 CTDP1Q9Y5B0 961 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-209ENST00000525854 A0A0G2JMZ2 1700 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 TRIM6-TRIM34B2RNG4 842 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 COBLO75128 1261 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 IGHA2P01877 340 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 FAM47AQ5JRC9 791 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 CHD1LQ86WJ1 897 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 EXOC6Q8TAG9 804 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 MMP19Q99542 508 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 FEM1BQ9UK73 627 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 ZNF214Q9UL59 606 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-209ENST00000525854 RLFQ13129 1914 aa13.81□□□□□ -0.2
HIF3A-209ENST00000525854 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-209ENST00000525854 FOXP2O15409 715 aa13.8□□□□□ -0.2
HIF3A-209ENST00000525854 ZBED4O75132 1171 aa13.8□□□□□ -0.2
HIF3A-209ENST00000525854 CYBAP13498 195 aa13.8□□□□□ -0.2
HIF3A-209ENST00000525854 NUCB1Q02818 461 aa13.8□□□□□ -0.2
HIF3A-209ENST00000525854 ALX1Q15699 326 aa13.8□□□□□ -0.2
HIF3A-209ENST00000525854 LRRC47Q8N1G4 583 aaKnown RBP13.8□□□□□ -0.2
HIF3A-209ENST00000525854 REPS2Q8NFH8 660 aa13.8□□□□□ -0.2
HIF3A-209ENST00000525854 ANAPC4Q9UJX5 808 aa13.8□□□□□ -0.2
HIF3A-209ENST00000525854 ZNF236Q9UL36 1845 aa13.8□□□□□ -0.2
HIF3A-209ENST00000525854 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 ATP2A1O14983 1001 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 COL6A1P12109 1028 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 MFAP1P55081 439 aaKnown RBP13.79□□□□□ -0.2
HIF3A-209ENST00000525854 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 SLFN13Q68D06 897 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 MAML3Q96JK9 1138 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 OSBPL3Q9H4L5 887 aa13.79□□□□□ -0.2
HIF3A-209ENST00000525854 DIS3Q9Y2L1 958 aaKnown RBP13.79□□□□□ -0.2
HIF3A-209ENST00000525854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
HIF3A-209ENST00000525854 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 SEPT4O43236 478 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 ORC4O43929 436 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
HIF3A-209ENST00000525854 IGHDP01880 384 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 FDX1P10109 184 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 BMP3P12645 472 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 OAZ1P54368 228 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 CTDSPL2Q05D32 466 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 SNRNP48Q6IEG0 339 aaKnown RBP13.78□□□□□ -0.2
HIF3A-209ENST00000525854 C7orf61Q8IZ16 206 aa13.78□□□□□ -0.2
HIF3A-209ENST00000525854 ARRDC4Q8NCT1 418 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms