RNA–Protein interactions for RNA: ENST00000525554.1

IFITM1-203, Transcript of interferon induced transmembrane protein 1, humanhuman

TSL 3

Gene IFITM1, Length 80 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-203ENST00000525554 MYH8P13535 1937 aa16.41■□□□□ 0.22
IFITM1-203ENST00000525554 BAZ2AQ9UIF9 1905 aaKnown RBP16.41■□□□□ 0.22
IFITM1-203ENST00000525554 A0A0G2JMZ2 1700 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 GSG1L2A8MUP6 293 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 VWA5AO00534 786 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 RNF113AO15541 343 aaKnown RBP16.4■□□□□ 0.22
IFITM1-203ENST00000525554 CHGBP05060 677 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 TMEM132BQ14DG7 1078 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 UBE2OQ9C0C9 1292 aaKnown RBP16.4■□□□□ 0.22
IFITM1-203ENST00000525554 MKNK2Q9HBH9 465 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 NYAP2Q9P242 653 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 PPP1R9AQ9ULJ8 1098 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 SYNPO2Q9UMS6 1093 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 MYH7P12883 1935 aa16.4■□□□□ 0.22
IFITM1-203ENST00000525554 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
IFITM1-203ENST00000525554 SOX1O00570 391 aaPredicted RBP16.39■□□□□ 0.21
IFITM1-203ENST00000525554 STAT3P40763 770 aa16.39■□□□□ 0.21
IFITM1-203ENST00000525554 CLEC10AQ8IUN9 316 aa16.39■□□□□ 0.21
IFITM1-203ENST00000525554 OSBP2Q969R2 916 aa16.39■□□□□ 0.21
IFITM1-203ENST00000525554 MAML3Q96JK9 1138 aa16.39■□□□□ 0.21
IFITM1-203ENST00000525554 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.39■□□□□ 0.21
IFITM1-203ENST00000525554 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
IFITM1-203ENST00000525554 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
IFITM1-203ENST00000525554 KBTBD13C9JR72 458 aa16.38■□□□□ 0.21
IFITM1-203ENST00000525554 ERC2O15083 957 aa16.38■□□□□ 0.21
IFITM1-203ENST00000525554 RASA1P20936 1047 aa16.38■□□□□ 0.21
IFITM1-203ENST00000525554 KCTD2Q14681 263 aa16.38■□□□□ 0.21
IFITM1-203ENST00000525554 MKL1Q969V6 931 aa16.38■□□□□ 0.21
IFITM1-203ENST00000525554 LRCH3Q96II8 777 aa16.38■□□□□ 0.21
IFITM1-203ENST00000525554 PATL2C9JE40 543 aaKnown RBP16.37■□□□□ 0.21
IFITM1-203ENST00000525554 F5H6K3 240 aa16.37■□□□□ 0.21
IFITM1-203ENST00000525554 ATP2A1O14983 1001 aa16.37■□□□□ 0.21
IFITM1-203ENST00000525554 KLRC3Q07444 240 aa16.37■□□□□ 0.21
IFITM1-203ENST00000525554 C1orf53Q5VUE5 145 aa16.37■□□□□ 0.21
IFITM1-203ENST00000525554 MSL3Q8N5Y2 521 aaKnown RBP16.37■□□□□ 0.21
IFITM1-203ENST00000525554 PRPF38AQ8NAV1 312 aaKnown RBP16.37■□□□□ 0.21
IFITM1-203ENST00000525554 MMP19Q99542 508 aa16.37■□□□□ 0.21
IFITM1-203ENST00000525554 LBHD1Q9BQE6 289 aaPredicted RBP16.37■□□□□ 0.21
IFITM1-203ENST00000525554 PRKAG2Q9UGJ0 569 aa16.37■□□□□ 0.21
IFITM1-203ENST00000525554 ZNF214Q9UL59 606 aaPredicted RBP16.37■□□□□ 0.21
IFITM1-203ENST00000525554 DNAH12Q6ZR08 3092 aa16.37■□□□□ 0.21
IFITM1-203ENST00000525554 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 GPAA1O43292 621 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 ZNF792Q3KQV3 632 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 FAM83BQ5T0W9 1011 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 SLC39A5Q6ZMH5 540 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
IFITM1-203ENST00000525554 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 SLF1Q9BQI6 1058 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 TEX13BQ9BXU2 312 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
IFITM1-203ENST00000525554 FRMPD3Q5JV73 1810 aa16.35■□□□□ 0.21
IFITM1-203ENST00000525554 IGKV6D-41A0A0C4DH26 115 aa16.35■□□□□ 0.21
IFITM1-203ENST00000525554 APPP05067 770 aa16.35■□□□□ 0.21
IFITM1-203ENST00000525554 TDO2P48775 406 aa16.35■□□□□ 0.21
IFITM1-203ENST00000525554 SNX17Q15036 470 aa16.35■□□□□ 0.21
IFITM1-203ENST00000525554 GJC2Q5T442 439 aaPredicted RBP16.35■□□□□ 0.21
IFITM1-203ENST00000525554 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
IFITM1-203ENST00000525554 RAD21O60216 631 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
IFITM1-203ENST00000525554 FDX1P10109 184 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 RARBP10826 455 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 ATN1P54259 1190 aaPredicted RBP16.34■□□□□ 0.21
IFITM1-203ENST00000525554 RTP1P59025 263 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 LRRC41Q15345 812 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
IFITM1-203ENST00000525554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.34■□□□□ 0.21
IFITM1-203ENST00000525554 IFNL3Q8IZI9 196 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 MTMR4Q9NYA4 1195 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 CLIP2Q9UDT6 1046 aa16.34■□□□□ 0.21
IFITM1-203ENST00000525554 ZNFX1Q9P2E3 1918 aaKnown RBP16.34■□□□□ 0.21
IFITM1-203ENST00000525554 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.21
IFITM1-203ENST00000525554 ZBED4O75132 1171 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 TTLL1O95922 423 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 NDUFB10O96000 172 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.2
IFITM1-203ENST00000525554 PDE4BQ07343 736 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 MAMDC4Q6UXC1 1216 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 RNF180Q86T96 592 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 DEFB123Q8N688 67 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 GMCL1P1Q8NEA9 526 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 EPB41L4AQ9HCS5 686 aaPredicted RBP16.33■□□□□ 0.2
IFITM1-203ENST00000525554 FEM1BQ9UK73 627 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 CNPY2Q9Y2B0 182 aa16.33■□□□□ 0.2
IFITM1-203ENST00000525554 PGK2P07205 417 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 OAZ1P54368 228 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 FAM109BQ6ICB4 259 aaPredicted RBP16.32■□□□□ 0.2
IFITM1-203ENST00000525554 ZNF467Q7Z7K2 595 aaPredicted RBP16.32■□□□□ 0.2
IFITM1-203ENST00000525554 TICAM2Q86XR7 235 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 PI4K2BQ8TCG2 481 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 SYNGAP1Q96PV0 1343 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 XPNPEP3Q9NQH7 507 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 FBXO40Q9UH90 709 aa16.32■□□□□ 0.2
IFITM1-203ENST00000525554 PHF24Q9UPV7 400 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms