RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 GOPCQ9HD26 462 aa20.61■□□□□ 0.89
TSKU-202ENST00000525167 ARPP21Q9UBL0 812 aaPredicted RBP20.61■□□□□ 0.89
TSKU-202ENST00000525167 SLC4A4Q9Y6R1 1079 aa20.61■□□□□ 0.89
TSKU-202ENST00000525167 DLL1O00548 723 aa20.6■□□□□ 0.89
TSKU-202ENST00000525167 EEF2P13639 858 aaKnown RBP20.6■□□□□ 0.89
TSKU-202ENST00000525167 C1orf53Q5VUE5 145 aa20.6■□□□□ 0.89
TSKU-202ENST00000525167 SLC39A5Q6ZMH5 540 aa20.6■□□□□ 0.89
TSKU-202ENST00000525167 LRRCC1Q9C099 1032 aa20.6■□□□□ 0.89
TSKU-202ENST00000525167 DIS3Q9Y2L1 958 aaKnown RBP20.6■□□□□ 0.89
TSKU-202ENST00000525167 MYH7P12883 1935 aa20.6■□□□□ 0.89
TSKU-202ENST00000525167 ROBO3Q96MS0 1386 aa20.59■□□□□ 0.89
TSKU-202ENST00000525167 SLFNL1Q499Z3 407 aa20.59■□□□□ 0.89
TSKU-202ENST00000525167 CTR9Q6PD62 1173 aa20.59■□□□□ 0.89
TSKU-202ENST00000525167 RIOX2Q8IUF8 465 aa20.59■□□□□ 0.89
TSKU-202ENST00000525167 BCL11AQ9H165 835 aa20.59■□□□□ 0.89
TSKU-202ENST00000525167 LTBP2Q14767 1821 aa20.58■□□□□ 0.89
TSKU-202ENST00000525167 CYP2D7A0A087X1C5 515 aa20.58■□□□□ 0.89
TSKU-202ENST00000525167 GIMAP6Q6P9H5 292 aa20.58■□□□□ 0.89
TSKU-202ENST00000525167 MMP19Q99542 508 aa20.58■□□□□ 0.89
TSKU-202ENST00000525167 PPP1R9AQ9ULJ8 1098 aa20.58■□□□□ 0.89
TSKU-202ENST00000525167 ATP11BQ9Y2G3 1177 aa20.58■□□□□ 0.89
TSKU-202ENST00000525167 POTEB2H3BUK9 544 aa20.57■□□□□ 0.88
TSKU-202ENST00000525167 VWA5AO00534 786 aa20.57■□□□□ 0.88
TSKU-202ENST00000525167 KCTD2Q14681 263 aa20.57■□□□□ 0.88
TSKU-202ENST00000525167 LRRC41Q15345 812 aa20.57■□□□□ 0.88
TSKU-202ENST00000525167 SBK1Q52WX2 424 aa20.57■□□□□ 0.88
TSKU-202ENST00000525167 PUS7LQ9H0K6 701 aaKnown RBP20.57■□□□□ 0.88
TSKU-202ENST00000525167 ZNF214Q9UL59 606 aaPredicted RBP20.57■□□□□ 0.88
TSKU-202ENST00000525167 SMIM22K7EJ46 135 aa20.56■□□□□ 0.88
TSKU-202ENST00000525167 RARBP10826 455 aa20.56■□□□□ 0.88
TSKU-202ENST00000525167 STAT3P40763 770 aa20.56■□□□□ 0.88
TSKU-202ENST00000525167 FAM47AQ5JRC9 791 aa20.56■□□□□ 0.88
TSKU-202ENST00000525167 ANO1Q5XXA6 986 aa20.56■□□□□ 0.88
TSKU-202ENST00000525167 TINF2Q9BSI4 451 aa20.56■□□□□ 0.88
TSKU-202ENST00000525167 FBXO28Q9NVF7 368 aa20.56■□□□□ 0.88
TSKU-202ENST00000525167 RCAN3Q9UKA8 241 aa20.56■□□□□ 0.88
TSKU-202ENST00000525167 GREB1LQ9C091 1923 aaPredicted RBP20.55■□□□□ 0.88
TSKU-202ENST00000525167 CHGBP05060 677 aa20.55■□□□□ 0.88
TSKU-202ENST00000525167 ZNF792Q3KQV3 632 aa20.55■□□□□ 0.88
TSKU-202ENST00000525167 PRAMEF19Q5SWL8 479 aa20.55■□□□□ 0.88
TSKU-202ENST00000525167 SAMD1Q6SPF0 538 aaPredicted RBP20.55■□□□□ 0.88
TSKU-202ENST00000525167 MSL3Q8N5Y2 521 aaKnown RBP20.55■□□□□ 0.88
TSKU-202ENST00000525167 REPS2Q8NFH8 660 aa20.55■□□□□ 0.88
TSKU-202ENST00000525167 STRBPQ96SI9 672 aaKnown RBP20.55■□□□□ 0.88
TSKU-202ENST00000525167 XPNPEP3Q9NQH7 507 aa20.55■□□□□ 0.88
TSKU-202ENST00000525167 ECHDC1Q9NTX5 307 aa20.55■□□□□ 0.88
TSKU-202ENST00000525167 PHF24Q9UPV7 400 aa20.55■□□□□ 0.88
TSKU-202ENST00000525167 A0A0C4DFX4 3053 aa20.55■□□□□ 0.88
TSKU-202ENST00000525167 COL11A1P12107 1806 aaPredicted RBP20.55■□□□□ 0.88
TSKU-202ENST00000525167 ADCYAP1R1P41586 468 aa20.54■□□□□ 0.88
TSKU-202ENST00000525167 TRIM60Q495X7 471 aa20.54■□□□□ 0.88
TSKU-202ENST00000525167 FAM83BQ5T0W9 1011 aa20.54■□□□□ 0.88
TSKU-202ENST00000525167 RNF180Q86T96 592 aa20.54■□□□□ 0.88
TSKU-202ENST00000525167 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.54■□□□□ 0.88
TSKU-202ENST00000525167 NYAP2Q9P242 653 aa20.54■□□□□ 0.88
TSKU-202ENST00000525167 LAMA2P24043 3122 aaKnown RBP20.53■□□□□ 0.88
TSKU-202ENST00000525167 MYCNP04198 464 aaPredicted RBP20.53■□□□□ 0.88
TSKU-202ENST00000525167 KBTBD3Q8NAB2 608 aa20.53■□□□□ 0.88
TSKU-202ENST00000525167 GPATCH3Q96I76 525 aa20.53■□□□□ 0.88
TSKU-202ENST00000525167 TEX13BQ9BXU2 312 aa20.53■□□□□ 0.88
TSKU-202ENST00000525167 PRDM5Q9NQX1 630 aaPredicted RBP20.53■□□□□ 0.88
TSKU-202ENST00000525167 PDLIM7Q9NR12 457 aa20.53■□□□□ 0.88
TSKU-202ENST00000525167 ZNFX1Q9P2E3 1918 aaKnown RBP20.53■□□□□ 0.88
TSKU-202ENST00000525167 GSG1L2A8MUP6 293 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 PGK2P07205 417 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 ZFYP08048 801 aaPredicted RBP20.52■□□□□ 0.88
TSKU-202ENST00000525167 AKR1A1P14550 325 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 RASA1P20936 1047 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 APPBP2Q92624 585 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 SLF1Q9BQI6 1058 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 MKNK2Q9HBH9 465 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 ZNF287Q9HBT7 754 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 SYNPO2Q9UMS6 1093 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 CNPY2Q9Y2B0 182 aa20.52■□□□□ 0.88
TSKU-202ENST00000525167 ATP2A1O14983 1001 aa20.51■□□□□ 0.87
TSKU-202ENST00000525167 RAD21O60216 631 aa20.51■□□□□ 0.87
TSKU-202ENST00000525167 GNAT2P19087 354 aa20.51■□□□□ 0.87
TSKU-202ENST00000525167 ZNF697Q5TEC3 545 aa20.51■□□□□ 0.87
TSKU-202ENST00000525167 PRPF38AQ8NAV1 312 aaKnown RBP20.51■□□□□ 0.87
TSKU-202ENST00000525167 FERMT2Q96AC1 680 aa20.51■□□□□ 0.87
TSKU-202ENST00000525167 TACC3Q9Y6A5 838 aa20.51■□□□□ 0.87
TSKU-202ENST00000525167 PLXNA1Q9UIW2 1896 aa20.51■□□□□ 0.87
TSKU-202ENST00000525167 SYNGAP1Q96PV0 1343 aa20.51■□□□□ 0.87
TSKU-202ENST00000525167 F5H6K3 240 aa20.5■□□□□ 0.87
TSKU-202ENST00000525167 SMARCA5O60264 1052 aaPredicted RBP20.5■□□□□ 0.87
TSKU-202ENST00000525167 ZNF865P0CJ78 1059 aaPredicted RBP20.5■□□□□ 0.87
TSKU-202ENST00000525167 KLRC3Q07444 240 aa20.5■□□□□ 0.87
TSKU-202ENST00000525167 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.5■□□□□ 0.87
TSKU-202ENST00000525167 BADQ92934 168 aa20.5■□□□□ 0.87
TSKU-202ENST00000525167 GUCD1Q96NT3 240 aa20.5■□□□□ 0.87
TSKU-202ENST00000525167 TSEN34Q9BSV6 310 aaKnown RBP20.5■□□□□ 0.87
TSKU-202ENST00000525167 RNF113AO15541 343 aaKnown RBP20.49■□□□□ 0.87
TSKU-202ENST00000525167 NDUFB10O96000 172 aa20.49■□□□□ 0.87
TSKU-202ENST00000525167 TLE2Q04725 743 aa20.49■□□□□ 0.87
TSKU-202ENST00000525167 SHHQ15465 462 aa20.49■□□□□ 0.87
TSKU-202ENST00000525167 LRRFIP1Q32MZ4 808 aaKnown RBP20.49■□□□□ 0.87
TSKU-202ENST00000525167 SNRNP48Q6IEG0 339 aaKnown RBP20.49■□□□□ 0.87
TSKU-202ENST00000525167 MAMDC4Q6UXC1 1216 aa20.49■□□□□ 0.87
TSKU-202ENST00000525167 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
TSKU-202ENST00000525167 OSBP2Q969R2 916 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms