RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 JAG1P78504 1218 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 PPIL2Q13356 520 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 PPP2R5BQ15173 497 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 PPP4R3BQ5MIZ7 849 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 NOL9Q5SY16 702 aaKnown RBP8.27□□□□□ -1.09
VPS11-201ENST00000524454 ATL3Q6DD88 541 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 STOX1Q6ZVD7 989 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 SCYL3Q8IZE3 742 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 SMARCC2Q8TAQ2 1214 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 SDR42E1Q8WUS8 393 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 STAG1Q8WVM7 1258 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 RIOK1Q9BRS2 568 aaKnown RBP8.27□□□□□ -1.09
VPS11-201ENST00000524454 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 KRT23Q9C075 422 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 MCOLN1Q9GZU1 580 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 DNAJC18Q9H819 358 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 PICK1Q9NRD5 415 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 ZHX2Q9Y6X8 837 aa8.27□□□□□ -1.09
VPS11-201ENST00000524454 LOC285556D6RIA3 1793 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 TRIM75PA6NK02 468 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 BTBD19C9JJ37 291 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 SMIM22K7EJ46 135 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 MBD4O95243 580 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 GDF11O95390 407 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 CYP2D6P10635 497 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 PTPRAP18433 802 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 SYT1P21579 422 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 GJB2P29033 226 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 LIFRP42702 1097 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 FGD1P98174 961 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 CAP1Q01518 475 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 PPATQ06203 517 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 SNAPC2Q13487 334 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 TAF1CQ15572 869 aaPredicted RBP8.26□□□□□ -1.09
VPS11-201ENST00000524454 Q6ZUG5 572 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 SGMS1Q86VZ5 419 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 IFNL3Q8IZI9 196 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 TMTC2Q8N394 836 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 ZDHHC16Q969W1 377 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 ABHD8Q96I13 439 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 NAPBQ9H115 298 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 ATP8A2Q9NTI2 1148 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 ELP1O95163 1332 aa8.26□□□□□ -1.09
VPS11-201ENST00000524454 CYP2D7A0A087X1C5 515 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 GSG1L2A8MUP6 293 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 FKTNO75072 461 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 CDKL5O76039 1030 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 LARGE1O95461 756 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 F13A1P00488 732 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 FGRP09769 529 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 CETPP11597 493 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 INHBEP58166 350 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 MAP3K10Q02779 954 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 ST3GAL1Q11201 340 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 MOGSQ13724 837 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 SART3Q15020 963 aaKnown RBP8.25□□□□□ -1.09
VPS11-201ENST00000524454 TYW1BQ6NUM6 668 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 GADL1Q6ZQY3 521 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 CCDC83Q8IWF9 413 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 CRACR2BQ8N4Y2 399 aaPredicted RBP8.25□□□□□ -1.09
VPS11-201ENST00000524454 CD99L2Q8TCZ2 262 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 BRF1Q92994 677 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 TRIM34Q9BYJ4 488 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 CRNKL1Q9BZJ0 848 aaKnown RBP8.25□□□□□ -1.09
VPS11-201ENST00000524454 ZSCAN16Q9H4T2 348 aaPredicted RBP8.25□□□□□ -1.09
VPS11-201ENST00000524454 TAF6LQ9Y6J9 622 aa8.25□□□□□ -1.09
VPS11-201ENST00000524454 ROBO3Q96MS0 1386 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 MGAMO43451 1857 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 CCDC85CA6NKD9 419 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 PDHXO00330 501 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 PRC1O43663 620 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 CTNND1O60716 968 aaKnown RBP8.24□□□□□ -1.09
VPS11-201ENST00000524454 ALDH1A1P00352 501 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
VPS11-201ENST00000524454 HLA-DOAP06340 250 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 CYP2C8P10632 490 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 CPA1P15085 419 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 CAP2P40123 477 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 PLCD1P51178 756 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 PKP1Q13835 747 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 SBK1Q52WX2 424 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 AKNAD1Q5T1N1 836 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 TREML2Q5T2D2 321 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 L1TD1Q5T7N2 865 aaKnown RBP8.24□□□□□ -1.09
VPS11-201ENST00000524454 OTUD7BQ6GQQ9 843 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 GPAT2Q6NUI2 795 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 CPLX2Q6PUV4 134 aaKnown RBP8.24□□□□□ -1.09
VPS11-201ENST00000524454 SLC44A5Q8NCS7 719 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 SYAP1Q96A49 352 aaPredicted RBP8.24□□□□□ -1.09
VPS11-201ENST00000524454 DYNLL2Q96FJ2 89 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 EPAS1Q99814 870 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 DHX36Q9H2U1 1008 aaKnown RBP8.24□□□□□ -1.09
VPS11-201ENST00000524454 EPB41L4AQ9HCS5 686 aaPredicted RBP8.24□□□□□ -1.09
VPS11-201ENST00000524454 LMBRD1Q9NUN5 540 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 MCM9Q9NXL9 1143 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 PI4KBQ9UBF8 816 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 ARPP21Q9UBL0 812 aaPredicted RBP8.24□□□□□ -1.09
VPS11-201ENST00000524454 CPA4Q9UI42 421 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms