RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 COBLO75128 1261 aa14.17□□□□□ -0.14
SPARC-206ENST00000524277 SYN1P17600 705 aa14.17□□□□□ -0.14
SPARC-206ENST00000524277 STAT3P40763 770 aa14.17□□□□□ -0.14
SPARC-206ENST00000524277 TMEM132BQ14DG7 1078 aa14.17□□□□□ -0.14
SPARC-206ENST00000524277 C20orf194Q5TEA3 1177 aa14.17□□□□□ -0.14
SPARC-206ENST00000524277 PRKAG2Q9UGJ0 569 aa14.17□□□□□ -0.14
SPARC-206ENST00000524277 SYNPO2Q9UMS6 1093 aa14.17□□□□□ -0.14
SPARC-206ENST00000524277 TTC41PQ6P2S7 1318 aa14.16□□□□□ -0.14
SPARC-206ENST00000524277 GSG1L2A8MUP6 293 aa14.16□□□□□ -0.14
SPARC-206ENST00000524277 KBTBD13C9JR72 458 aa14.16□□□□□ -0.14
SPARC-206ENST00000524277 VWA5AO00534 786 aa14.16□□□□□ -0.14
SPARC-206ENST00000524277 KCTD2Q14681 263 aa14.16□□□□□ -0.14
SPARC-206ENST00000524277 TRPV1Q8NER1 839 aa14.16□□□□□ -0.14
SPARC-206ENST00000524277 MAML3Q96JK9 1138 aa14.16□□□□□ -0.14
SPARC-206ENST00000524277 MMP19Q99542 508 aa14.16□□□□□ -0.14
SPARC-206ENST00000524277 LBHD1Q9BQE6 289 aaPredicted RBP14.16□□□□□ -0.14
SPARC-206ENST00000524277 MYH8P13535 1937 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 RLFQ13129 1914 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 ROBO3Q96MS0 1386 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 SOX1O00570 391 aaPredicted RBP14.15□□□□□ -0.14
SPARC-206ENST00000524277 RASA1P20936 1047 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 CLEC10AQ8IUN9 316 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 ZNF444Q8N0Y2 327 aaPredicted RBP14.15□□□□□ -0.14
SPARC-206ENST00000524277 MSL3Q8N5Y2 521 aaKnown RBP14.15□□□□□ -0.14
SPARC-206ENST00000524277 OSBP2Q969R2 916 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 NACAP1Q9BZK3 213 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 MYH7P12883 1935 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 BAZ2AQ9UIF9 1905 aaKnown RBP14.15□□□□□ -0.14
SPARC-206ENST00000524277 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
SPARC-206ENST00000524277 MINDY4BA8MYZ0 360 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 PATL2C9JE40 543 aaKnown RBP14.14□□□□□ -0.15
SPARC-206ENST00000524277 GPAA1O43292 621 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 RAD21O60216 631 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 CHGBP05060 677 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 SLC3A2P08195 630 aaKnown RBP14.14□□□□□ -0.15
SPARC-206ENST00000524277 FDX1P10109 184 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 PPP4R3BQ5MIZ7 849 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 FAM83BQ5T0W9 1011 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 C1orf53Q5VUE5 145 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
SPARC-206ENST00000524277 PRPF38AQ8NAV1 312 aaKnown RBP14.14□□□□□ -0.15
SPARC-206ENST00000524277 MKL1Q969V6 931 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 SLF1Q9BQI6 1058 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 TINF2Q9BSI4 451 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPARC-206ENST00000524277 TEX13BQ9BXU2 312 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 LAMA3Q16787 3333 aa14.14□□□□□ -0.15
SPARC-206ENST00000524277 F5H6K3 240 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 SMIM22K7EJ46 135 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 APPP05067 770 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 TDO2P48775 406 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 RTP1P59025 263 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 PDE4BQ07343 736 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 KLRC3Q07444 240 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 ZNF792Q3KQV3 632 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 GJC2Q5T442 439 aaPredicted RBP14.13□□□□□ -0.15
SPARC-206ENST00000524277 SLC39A5Q6ZMH5 540 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 REPS2Q8NFH8 660 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 LRCH3Q96II8 777 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
SPARC-206ENST00000524277 ZNF214Q9UL59 606 aaPredicted RBP14.13□□□□□ -0.15
SPARC-206ENST00000524277 CTDP1Q9Y5B0 961 aaPredicted RBP14.13□□□□□ -0.15
SPARC-206ENST00000524277 ZBED4O75132 1171 aa14.12□□□□□ -0.15
SPARC-206ENST00000524277 RARBP10826 455 aa14.12□□□□□ -0.15
SPARC-206ENST00000524277 ATN1P54259 1190 aaPredicted RBP14.12□□□□□ -0.15
SPARC-206ENST00000524277 LRRC41Q15345 812 aa14.12□□□□□ -0.15
SPARC-206ENST00000524277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.12□□□□□ -0.15
SPARC-206ENST00000524277 RNF180Q86T96 592 aa14.12□□□□□ -0.15
SPARC-206ENST00000524277 CLIP2Q9UDT6 1046 aa14.12□□□□□ -0.15
SPARC-206ENST00000524277 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
SPARC-206ENST00000524277 CNPY2Q9Y2B0 182 aa14.12□□□□□ -0.15
SPARC-206ENST00000524277 IGKV6D-41A0A0C4DH26 115 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 TTLL1O95922 423 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 AKR1A1P14550 325 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 OAZ1P54368 228 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 MDM2Q00987 491 aaPredicted RBP14.11□□□□□ -0.15
SPARC-206ENST00000524277 SNX17Q15036 470 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 TICAM2Q86XR7 235 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 IFNL3Q8IZI9 196 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 DEFB123Q8N688 67 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 GMCL1P1Q8NEA9 526 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 DDX11Q96FC9 970 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 MTMR4Q9NYA4 1195 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 FBXO40Q9UH90 709 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 FEM1BQ9UK73 627 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 SYNGAP1Q96PV0 1343 aa14.11□□□□□ -0.15
SPARC-206ENST00000524277 NDUFB10O96000 172 aa14.1□□□□□ -0.15
SPARC-206ENST00000524277 TSPY3P0CV98 308 aa14.1□□□□□ -0.15
SPARC-206ENST00000524277 TSPY8P0CW00 308 aa14.1□□□□□ -0.15
SPARC-206ENST00000524277 PRAMEF19Q5SWL8 479 aa14.1□□□□□ -0.15
SPARC-206ENST00000524277 FAM109BQ6ICB4 259 aaPredicted RBP14.1□□□□□ -0.15
SPARC-206ENST00000524277 SNRNP48Q6IEG0 339 aaKnown RBP14.1□□□□□ -0.15
SPARC-206ENST00000524277 MAMDC4Q6UXC1 1216 aa14.1□□□□□ -0.15
SPARC-206ENST00000524277 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
SPARC-206ENST00000524277 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
SPARC-206ENST00000524277 TSEN34Q9BSV6 310 aaKnown RBP14.1□□□□□ -0.15
SPARC-206ENST00000524277 XPNPEP3Q9NQH7 507 aa14.1□□□□□ -0.15
SPARC-206ENST00000524277 PHF24Q9UPV7 400 aa14.1□□□□□ -0.15
SPARC-206ENST00000524277 ATP11BQ9Y2G3 1177 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms