RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
CLK4-211ENST00000522556 GRK4P32298 578 aa21.13■□□□□ 0.97
CLK4-211ENST00000522556 MFSD6Q6ZSS7 791 aa21.13■□□□□ 0.97
CLK4-211ENST00000522556 GPR142Q7Z601 462 aa21.13■□□□□ 0.97
CLK4-211ENST00000522556 COA7Q96BR5 231 aa21.13■□□□□ 0.97
CLK4-211ENST00000522556 ZKSCAN3Q9BRR0 538 aa21.13■□□□□ 0.97
CLK4-211ENST00000522556 MOV10L1Q9BXT6 1211 aaKnown RBP21.13■□□□□ 0.97
CLK4-211ENST00000522556 MTMR7Q9Y216 660 aa21.13■□□□□ 0.97
CLK4-211ENST00000522556 BRCA2P51587 3418 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 B4E1Z4 1266 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 NOVP48745 357 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 TMEM132BQ14DG7 1078 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 BMP2KLQ5H9B9 411 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 SLFN13Q68D06 897 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 RCSD1Q6JBY9 416 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 GMCL1P1Q8NEA9 526 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 REPS2Q8NFH8 660 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 PPP1R9AQ9ULJ8 1098 aa21.12■□□□□ 0.97
CLK4-211ENST00000522556 ADCY3O60266 1144 aa21.11■□□□□ 0.97
CLK4-211ENST00000522556 TRIM32Q13049 653 aa21.11■□□□□ 0.97
CLK4-211ENST00000522556 WDR78Q5VTH9 848 aa21.11■□□□□ 0.97
CLK4-211ENST00000522556 RUFY2Q8WXA3 655 aa21.11■□□□□ 0.97
CLK4-211ENST00000522556 SPATC1LQ9H0A9 340 aa21.11■□□□□ 0.97
CLK4-211ENST00000522556 HOXC10Q9NYD6 342 aa21.11■□□□□ 0.97
CLK4-211ENST00000522556 ADAMTS5Q9UNA0 930 aa21.11■□□□□ 0.97
CLK4-211ENST00000522556 KDM4AO75164 1064 aa21.1■□□□□ 0.97
CLK4-211ENST00000522556 CYP21A2P08686 494 aa21.1■□□□□ 0.97
CLK4-211ENST00000522556 CYP2B6P20813 491 aa21.1■□□□□ 0.97
CLK4-211ENST00000522556 MAPK4P31152 587 aa21.1■□□□□ 0.97
CLK4-211ENST00000522556 IRF5Q13568 498 aa21.1■□□□□ 0.97
CLK4-211ENST00000522556 PLS1Q14651 629 aa21.1■□□□□ 0.97
CLK4-211ENST00000522556 IMMTQ16891 758 aaKnown RBP21.1■□□□□ 0.97
CLK4-211ENST00000522556 MORN1Q5T089 497 aa21.1■□□□□ 0.97
CLK4-211ENST00000522556 ESYT1Q9BSJ8 1104 aa21.1■□□□□ 0.97
CLK4-211ENST00000522556 KIAA0100Q14667 2235 aaKnown RBP21.1■□□□□ 0.97
CLK4-211ENST00000522556 ZNF236Q9UL36 1845 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 VWA5AO00534 786 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 MCCP23508 829 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 CCL14Q16627 93 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 KCTD1Q719H9 257 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 PLEKHH3Q7Z736 793 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 TRIB2Q92519 343 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 USP6NLQ92738 828 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 SLF1Q9BQI6 1058 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 TMEM47Q9BQJ4 181 aa21.09■□□□□ 0.97
CLK4-211ENST00000522556 INHAP05111 366 aa21.08■□□□□ 0.97
CLK4-211ENST00000522556 ERCC3P19447 782 aa21.08■□□□□ 0.97
CLK4-211ENST00000522556 STOX1Q6ZVD7 989 aa21.08■□□□□ 0.97
CLK4-211ENST00000522556 SLAIN1Q8ND83 568 aa21.08■□□□□ 0.97
CLK4-211ENST00000522556 LSG1Q9H089 658 aaKnown RBP21.08■□□□□ 0.97
CLK4-211ENST00000522556 RNF41Q9H4P4 317 aaPredicted RBP21.08■□□□□ 0.97
CLK4-211ENST00000522556 TCP11L1Q9NUJ3 509 aa21.08■□□□□ 0.97
CLK4-211ENST00000522556 CTNNA3Q9UI47 895 aa21.08■□□□□ 0.97
CLK4-211ENST00000522556 ZNF214Q9UL59 606 aaPredicted RBP21.08■□□□□ 0.97
CLK4-211ENST00000522556 ISY1Q9ULR0 285 aaKnown RBP21.08■□□□□ 0.97
CLK4-211ENST00000522556 SYNPO2Q9UMS6 1093 aa21.08■□□□□ 0.97
CLK4-211ENST00000522556 PCP11498 1178 aaKnown RBP21.07■□□□□ 0.96
CLK4-211ENST00000522556 BMP3P12645 472 aa21.07■□□□□ 0.96
CLK4-211ENST00000522556 CCNA1P78396 465 aa21.07■□□□□ 0.96
CLK4-211ENST00000522556 COL9A3Q14050 684 aaPredicted RBP21.07■□□□□ 0.96
CLK4-211ENST00000522556 CYB5R4Q7L1T6 521 aa21.07■□□□□ 0.96
CLK4-211ENST00000522556 CCAR1Q8IX12 1150 aaKnown RBP21.07■□□□□ 0.96
CLK4-211ENST00000522556 ESR2Q92731 530 aa21.07■□□□□ 0.96
CLK4-211ENST00000522556 KIFC2Q96AC6 838 aa21.07■□□□□ 0.96
CLK4-211ENST00000522556 NUDT12Q9BQG2 462 aa21.07■□□□□ 0.96
CLK4-211ENST00000522556 UNC93B1Q9H1C4 597 aa21.07■□□□□ 0.96
CLK4-211ENST00000522556 BIN2Q9UBW5 565 aaPredicted RBP21.07■□□□□ 0.96
CLK4-211ENST00000522556 RBM8AQ9Y5S9 174 aaKnown RBP21.07■□□□□ 0.96
CLK4-211ENST00000522556 ZNFX1Q9P2E3 1918 aaKnown RBP21.06■□□□□ 0.96
CLK4-211ENST00000522556 TMEM232C9JQI7 657 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 TAL1P17542 331 aaPredicted RBP21.06■□□□□ 0.96
CLK4-211ENST00000522556 EN2P19622 333 aaPredicted RBP21.06■□□□□ 0.96
CLK4-211ENST00000522556 PTPREP23469 700 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 RGS19P49795 217 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 SNAP25P60880 206 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 TTBK2Q6IQ55 1244 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 NBPF11Q86T75 865 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 MB21D1Q8N884 522 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 SOCS4Q8WXH5 440 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 MAP4K1Q92918 833 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 GMCL1Q96IK5 515 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 PPP4R2Q9NY27 417 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 ZSWIM5Q9P217 1185 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 RIPK3Q9Y572 518 aa21.06■□□□□ 0.96
CLK4-211ENST00000522556 FRMPD2Q68DX3 1309 aaPredicted RBP21.05■□□□□ 0.96
CLK4-211ENST00000522556 TOP1P11387 765 aaKnown RBP21.05■□□□□ 0.96
CLK4-211ENST00000522556 CCL5P13501 91 aa21.05■□□□□ 0.96
CLK4-211ENST00000522556 SLC1A4P43007 532 aa21.05■□□□□ 0.96
CLK4-211ENST00000522556 GRB14Q14449 540 aa21.05■□□□□ 0.96
CLK4-211ENST00000522556 NCAPG2Q86XI2 1143 aa21.05■□□□□ 0.96
CLK4-211ENST00000522556 NPLOC4Q8TAT6 608 aa21.05■□□□□ 0.96
CLK4-211ENST00000522556 PXYLP1Q8TE99 480 aa21.05■□□□□ 0.96
CLK4-211ENST00000522556 CWC22Q9HCG8 908 aaKnown RBP21.05■□□□□ 0.96
CLK4-211ENST00000522556 FLRT1Q9NZU1 646 aa21.05■□□□□ 0.96
CLK4-211ENST00000522556 U3KPZ7 1027 aaPredicted RBP21.05■□□□□ 0.96
CLK4-211ENST00000522556 SMCHD1A6NHR9 2005 aa21.05■□□□□ 0.96
CLK4-211ENST00000522556 MAP2K5Q13163 448 aa21.04■□□□□ 0.96
CLK4-211ENST00000522556 CCDC96Q2M329 555 aa21.04■□□□□ 0.96
CLK4-211ENST00000522556 SHISA4Q96DD7 197 aa21.04■□□□□ 0.96
CLK4-211ENST00000522556 RAVER2Q9HCJ3 691 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms