RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 PLS1Q14651 629 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 SBK1Q52WX2 424 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 GIMAP6Q6P9H5 292 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 CTR9Q6PD62 1173 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 NCAPG2Q86XI2 1143 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 ARRDC4Q8NCT1 418 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 MAML3Q96JK9 1138 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 PUS7LQ9H0K6 701 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 BCL11AQ9H165 835 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 GOPCQ9HD26 462 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 ECHDC1Q9NTX5 307 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 ADAMTS5Q9UNA0 930 aa10.68□□□□□ -0.7
CTNNA1-229ENST00000521683 KBTBD13C9JR72 458 aa10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 SMIM22K7EJ46 135 aa10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 TMEM132BQ14DG7 1078 aa10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 C20orf194Q5TEA3 1177 aa10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 RIOX2Q8IUF8 465 aa10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 KBTBD3Q8NAB2 608 aa10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 GPATCH3Q96I76 525 aa10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 STRBPQ96SI9 672 aaKnown RBP10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 PPP1R9AQ9ULJ8 1098 aa10.67□□□□□ -0.7
CTNNA1-229ENST00000521683 COL11A1P12107 1806 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 GSG1L2A8MUP6 293 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 VWA5AO00534 786 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 SMARCA5O60264 1052 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 ZFYP08048 801 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 RTP1P59025 263 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 SNX17Q15036 470 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 GJC2Q5T442 439 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 C1orf53Q5VUE5 145 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 DEFB123Q8N688 67 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 REPS2Q8NFH8 660 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 APPBP2Q92624 585 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 DCTPP1Q9H773 170 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 FBXO28Q9NVF7 368 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 NYAP2Q9P242 653 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 PRKAG2Q9UGJ0 569 aa10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 DIS3Q9Y2L1 958 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-229ENST00000521683 LTBP2Q14767 1821 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 GNAT2P19087 354 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 RASA1P20936 1047 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 STAT3P40763 770 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 KCTD2Q14681 263 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 LRRC41Q15345 812 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 FAM83BQ5T0W9 1011 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 SLC39A5Q6ZMH5 540 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 OSBP2Q969R2 916 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 MMP19Q99542 508 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 LBHD1Q9BQE6 289 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 SYNPO2Q9UMS6 1093 aa10.65□□□□□ -0.7
CTNNA1-229ENST00000521683 ZNFX1Q9P2E3 1918 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 A0A0C4DFX4 3053 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 RNF113AO15541 343 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 LRRFIP1Q32MZ4 808 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 ZNF792Q3KQV3 632 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 FAM47AQ5JRC9 791 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 FAM109BQ6ICB4 259 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 MSL3Q8N5Y2 521 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 SLC17A8Q8NDX2 589 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 SLF1Q9BQI6 1058 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 TEX13BQ9BXU2 312 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 MKNK2Q9HBH9 465 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 ZNF287Q9HBT7 754 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 EPB41L4AQ9HCS5 686 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 MTMR10Q9NXD2 777 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 ATP11BQ9Y2G3 1177 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 STXBP5LQ9Y2K9 1186 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 PLIN4Q96Q06 1357 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 PLXNA1Q9UIW2 1896 aa10.64□□□□□ -0.71
CTNNA1-229ENST00000521683 IGKV6D-41A0A0C4DH26 115 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 F5H6K3 240 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 ATP2A1O14983 1001 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 GPAA1O43292 621 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 NDUFB10O96000 172 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 PGK2P07205 417 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 RARBP10826 455 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 KLRC3Q07444 240 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 PRAMEF19Q5SWL8 479 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 ANO1Q5XXA6 986 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 Q7L0L9 218 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 XPNPEP3Q9NQH7 507 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 PHF24Q9UPV7 400 aa10.63□□□□□ -0.71
CTNNA1-229ENST00000521683 LAMA2P24043 3122 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 TTC41PQ6P2S7 1318 aa10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 SYNGAP1Q96PV0 1343 aa10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 SMCHD1A6NHR9 2005 aa10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 MINDY4BA8MYZ0 360 aa10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 RAD21O60216 631 aa10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 ZNF865P0CJ78 1059 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 AKR1A1P14550 325 aa10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 ADCYAP1R1P41586 468 aa10.62□□□□□ -0.71
CTNNA1-229ENST00000521683 TDO2P48775 406 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms