RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 LRIG2O94898 1065 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 CLSTN1O94985 981 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 TP53P04637 393 aaPredicted RBP4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 ASPAP45381 313 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 CD97P48960 835 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 PPP2R2AP63151 447 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 ANKRD34AQ69YU3 496 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 DYMQ7RTS9 669 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 ZNF227Q86WZ6 799 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 LRRC47Q8N1G4 583 aaKnown RBP4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 ARHGEF39Q8N4T4 335 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 C12orf50Q8NA57 414 aaPredicted RBP4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 SMARCC1Q92922 1105 aaPredicted RBP4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 NINJ1Q92982 152 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 RCC1LQ96I51 464 aaKnown RBP4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 ZNF512BQ96KM6 892 aaPredicted RBP4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 SEMA6CQ9H3T2 930 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 C1GALT1Q9NS00 363 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 PCMTD2Q9NV79 361 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 PCOLCE2Q9UKZ9 415 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 AP4E1Q9UPM8 1137 aa4.99□□□□□ -1.61
HMGN1P28-201ENST00000521340 CCDC163A0A0D9SF12 145 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 IQCA1LA6NCM1 817 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 CLEC3AO75596 197 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 EOMESO95936 686 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 IGLV1-40P01703 118 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 FGFR1P11362 822 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 CD247P20963 164 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 IGBP1P78318 339 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 HNRNPUQ00839 825 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 PABPC4Q13310 644 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 AUHQ13825 339 aaKnown RBP4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 C21orf62-AS1Q17RA5 79 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 NBPF9Q3BBW0 867 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 TRIM61Q5EBN2 209 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 PHACTR4Q8IZ21 702 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 MFSD2AQ8NA29 543 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 GATA6Q92908 595 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 C1orf159Q96HA4 380 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 KREMEN1Q96MU8 473 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 APBA2Q99767 749 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 DHRS4Q9BTZ2 278 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 NCOA5Q9HCD5 579 aaKnown RBP4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 STOML1Q9UBI4 398 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 PLAAQ9Y263 795 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 EMC9Q9Y3B6 208 aa4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 MRPS23Q9Y3D9 190 aaKnown RBP4.98□□□□□ -1.61
HMGN1P28-201ENST00000521340 A0A087WZG4 1122 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 GSG1L2A8MUP6 293 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 ARNTLO00327 626 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 PLD2O14939 933 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 TGFB1P01137 390 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 SDSP20132 328 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 CDK11BP21127 795 aaKnown RBP4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 GBP1P32455 592 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 ZNF445P59923 1031 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 FNDC3BQ53EP0 1204 aaKnown RBP4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 RNF180Q86T96 592 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 JAMLQ86YT9 394 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 ZDHHC13Q8IUH4 622 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 SCUBE1Q8IWY4 988 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 C7orf61Q8IZ16 206 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 FGD4Q96M96 766 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 TRIM39Q9HCM9 518 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 GP6Q9HCN6 339 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 FAM86C1Q9NVL1 165 aa4.97□□□□□ -1.61
HMGN1P28-201ENST00000521340 hCG_2014768A0A024R1R8 64 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 DHX15O43143 795 aaKnown RBP4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 DLX3O60479 287 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 ADAMTS4O75173 837 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 LRRN2O75325 713 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 RAPGEF3O95398 923 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 NFICP08651 508 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 PABPC1P11940 636 aaKnown RBP4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 STAT3P40763 770 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 SNW1Q13573 536 aaKnown RBP4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 SF1Q15637 639 aaKnown RBP4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 NTRK3Q16288 839 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 MCTP1Q6DN14 999 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 DENND5AQ6IQ26 1287 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 LETMD1Q6P1Q0 360 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 CDC37L1Q7L3B6 337 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 CDH24Q86UP0 819 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 TRIM59Q8IWR1 403 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 DHX37Q8IY37 1157 aaKnown RBP4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 GSTCDQ8NEC7 633 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 ZCRB1Q8TBF4 217 aaKnown RBP4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 XAGE3Q8WTP9 111 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 CEP41Q9BYV8 373 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 C7orf69Q9H7B7 122 aa4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 DDX56Q9NY93 547 aaKnown RBP4.96□□□□□ -1.62
HMGN1P28-201ENST00000521340 TRBV23-1A0A0A0MS06 115 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 TRAV20A0A0B4J274 112 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 HMX2A2RU54 273 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 PRR19A6NJB7 356 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 KIAA1324LA8MWY0 1029 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms