RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 REPS2Q8NFH8 660 aa16.28■□□□□ 0.2
TMEM55A-205ENST00000520709 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
TMEM55A-205ENST00000520709 CHMP4BQ9H444 224 aaKnown RBP16.28■□□□□ 0.2
TMEM55A-205ENST00000520709 MTMR10Q9NXD2 777 aa16.28■□□□□ 0.2
TMEM55A-205ENST00000520709 ZNF214Q9UL59 606 aaPredicted RBP16.28■□□□□ 0.2
TMEM55A-205ENST00000520709 ATN1P54259 1190 aaPredicted RBP16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 PLS1Q14651 629 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 GJC2Q5T442 439 aaPredicted RBP16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 C20orf194Q5TEA3 1177 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 NCAPG2Q86XI2 1143 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 PPP1R9AQ9ULJ8 1098 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 STXBP5LQ9Y2K9 1186 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 SLC4A4Q9Y6R1 1079 aa16.27■□□□□ 0.2
TMEM55A-205ENST00000520709 LCTP09848 1927 aa16.27■□□□□ 0.19
TMEM55A-205ENST00000520709 SLC25A27O95847 323 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 ANO1Q5XXA6 986 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 ZSCAN25Q6NSZ9 544 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 RIOX2Q8IUF8 465 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 AMOTL1Q8IY63 956 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 ARRDC4Q8NCT1 418 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 SLC17A8Q8NDX2 589 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 SLC5A4Q9NY91 659 aa16.26■□□□□ 0.19
TMEM55A-205ENST00000520709 EYSQ5T1H1 3165 aa16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 VWA5AO00534 786 aa16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 SMARCA5O60264 1052 aaPredicted RBP16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 FCER1AP12319 257 aa16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 LRRC41Q15345 812 aa16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 PRAMEF19Q5SWL8 479 aa16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 SLC39A5Q6ZMH5 540 aa16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 STRBPQ96SI9 672 aaKnown RBP16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 BCL11AQ9H165 835 aa16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 NRBP1Q9UHY1 535 aa16.25■□□□□ 0.19
TMEM55A-205ENST00000520709 GSG1L2A8MUP6 293 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 KBTBD13C9JR72 458 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 RASA1P20936 1047 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 ZNF792Q3KQV3 632 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 FAM83BQ5T0W9 1011 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 KBTBD3Q8NAB2 608 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 MMP19Q99542 508 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 GOPCQ9HD26 462 aa16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 DIS3Q9Y2L1 958 aaKnown RBP16.24■□□□□ 0.19
TMEM55A-205ENST00000520709 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 COPB2P35606 906 aa16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 TRIM60Q495X7 471 aa16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 GIMAP6Q6P9H5 292 aa16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 OSBP2Q969R2 916 aa16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 PDLIM7Q9NR12 457 aa16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 ATP11BQ9Y2G3 1177 aa16.23■□□□□ 0.19
TMEM55A-205ENST00000520709 CDH23Q9H251 3354 aa16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 PGK2P07205 417 aa16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 STAT3P40763 770 aa16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 APPBP2Q92624 585 aa16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 LBHD1Q9BQE6 289 aaPredicted RBP16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 TINF2Q9BSI4 451 aa16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 NYAP2Q9P242 653 aa16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 PHF24Q9UPV7 400 aa16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 PLIN4Q96Q06 1357 aa16.22■□□□□ 0.19
TMEM55A-205ENST00000520709 ZNF865P0CJ78 1059 aaPredicted RBP16.21■□□□□ 0.19
TMEM55A-205ENST00000520709 TAL1P17542 331 aaPredicted RBP16.21■□□□□ 0.19
TMEM55A-205ENST00000520709 ADCYAP1R1P41586 468 aa16.21■□□□□ 0.19
TMEM55A-205ENST00000520709 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
TMEM55A-205ENST00000520709 GUCD1Q96NT3 240 aa16.21■□□□□ 0.19
TMEM55A-205ENST00000520709 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
TMEM55A-205ENST00000520709 DCTPP1Q9H773 170 aa16.21■□□□□ 0.19
TMEM55A-205ENST00000520709 DNAJC25-GNG10A0A024R161 153 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 TRIM43BA6NCK2 446 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 DLL1O00548 723 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 NDUFB10O96000 172 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 KCTD2Q14681 263 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 SH3RF1Q7Z6J0 888 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 TRIM43Q96BQ3 446 aaPredicted RBP16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 SLF1Q9BQI6 1058 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 TEX13BQ9BXU2 312 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 XPNPEP3Q9NQH7 507 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 PRKAG2Q9UGJ0 569 aa16.2■□□□□ 0.18
TMEM55A-205ENST00000520709 GBF1Q92538 1859 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 F5H6K3 240 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 M0R2C6 588 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 ATP2A1O14983 1001 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 GPAA1O43292 621 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 ADAMTS4O75173 837 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 RARBP10826 455 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 AKR1A1P14550 325 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 KLRC3Q07444 240 aa16.19■□□□□ 0.18
TMEM55A-205ENST00000520709 C9orf50Q5SZB4 431 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms