RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CFAP100Q494V2 611 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 TBC1D22AQ8WUA7 517 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 EYA3Q99504 573 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 PCDHA4Q9UN74 947 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 ANKRD31Q8N7Z5 1873 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 PLCG2P16885 1265 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 CASP1P29466 404 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 TXNRD1Q16881 649 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 HSP90AA4PQ58FG1 418 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 TRMT44Q8IYL2 757 aaKnown RBP29.32■■■□□ 2.28
COL13A1-213ENST00000520267 MED15Q96RN5 788 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 ZNF287Q9HBT7 754 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 GAKO14976 1311 aa29.32■■■□□ 2.28
COL13A1-213ENST00000520267 PALM3A6NDB9 673 aaPredicted RBP29.31■■■□□ 2.28
COL13A1-213ENST00000520267 PPEF1O14829 653 aaPredicted RBP29.31■■■□□ 2.28
COL13A1-213ENST00000520267 RASGRP2Q7LDG7 609 aa29.31■■■□□ 2.28
COL13A1-213ENST00000520267 ENOX1Q8TC92 643 aaKnown RBP29.31■■■□□ 2.28
COL13A1-213ENST00000520267 RASGRP4Q8TDF6 673 aa29.31■■■□□ 2.28
COL13A1-213ENST00000520267 TMEM232C9JQI7 657 aa29.31■■■□□ 2.28
COL13A1-213ENST00000520267 SFPQP23246 707 aaKnown RBP eCLIP29.31■■■□□ 2.28
COL13A1-213ENST00000520267 WWC2Q6AWC2 1192 aa29.31■■■□□ 2.28
COL13A1-213ENST00000520267 NFE2L3Q9Y4A8 694 aa29.31■■■□□ 2.28
COL13A1-213ENST00000520267 RIMBP2O15034 1052 aa29.3■■■□□ 2.28
COL13A1-213ENST00000520267 GOLGA8HP0CJ92 632 aa29.3■■■□□ 2.28
COL13A1-213ENST00000520267 GTF2IP78347 998 aa29.3■■■□□ 2.28
COL13A1-213ENST00000520267 SLF2Q8IX21 1173 aa29.3■■■□□ 2.28
COL13A1-213ENST00000520267 SP8Q8IXZ3 490 aa29.3■■■□□ 2.28
COL13A1-213ENST00000520267 CCAR2Q8N163 923 aaKnown RBP29.3■■■□□ 2.28
COL13A1-213ENST00000520267 TRMT1Q9NXH9 659 aaKnown RBP29.3■■■□□ 2.28
COL13A1-213ENST00000520267 NEDD1Q8NHV4 660 aa29.29■■■□□ 2.28
COL13A1-213ENST00000520267 CCDC34Q96HJ3 373 aa29.29■■■□□ 2.28
COL13A1-213ENST00000520267 FOCADQ5VW36 1801 aa29.29■■■□□ 2.28
COL13A1-213ENST00000520267 M0R2N6 131 aa29.29■■■□□ 2.28
COL13A1-213ENST00000520267 PTPN21Q16825 1174 aa29.29■■■□□ 2.28
COL13A1-213ENST00000520267 KCND1Q9NSA2 647 aa29.29■■■□□ 2.28
COL13A1-213ENST00000520267 INTS13Q9NVM9 706 aa29.29■■■□□ 2.28
COL13A1-213ENST00000520267 ZNF18P17022 549 aa29.28■■■□□ 2.28
COL13A1-213ENST00000520267 DPYDQ12882 1025 aa29.28■■■□□ 2.28
COL13A1-213ENST00000520267 VSTM4Q8IW00 320 aa29.28■■■□□ 2.28
COL13A1-213ENST00000520267 C4orf32Q8N8J7 132 aa29.28■■■□□ 2.28
COL13A1-213ENST00000520267 HEATR3Q7Z4Q2 680 aa29.28■■■□□ 2.28
COL13A1-213ENST00000520267 STXBP3O00186 592 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 NYAP1Q6ZVC0 841 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 CPVLQ9H3G5 476 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 PCDHA6Q9UN73 950 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 DAGLAQ9Y4D2 1042 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 PCDHA8Q9Y5H6 950 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 KLRF2D3W0D1 207 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 E2F4Q16254 413 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 TMC4Q7Z404 712 aa29.27■■■□□ 2.28
COL13A1-213ENST00000520267 DHX8Q14562 1220 aaKnown RBP29.26■■■□□ 2.27
COL13A1-213ENST00000520267 CEP135Q66GS9 1140 aa29.26■■■□□ 2.27
COL13A1-213ENST00000520267 STAMQ92783 540 aa29.26■■■□□ 2.27
COL13A1-213ENST00000520267 BARHL2Q9NY43 387 aa29.26■■■□□ 2.27
COL13A1-213ENST00000520267 ATP6V0A2Q9Y487 856 aa29.26■■■□□ 2.27
COL13A1-213ENST00000520267 E4F1Q66K89 784 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-213ENST00000520267 CD44P16070 742 aaKnown RBP29.25■■■□□ 2.27
COL13A1-213ENST00000520267 ERCC5P28715 1186 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-213ENST00000520267 PTPN14Q15678 1187 aa29.25■■■□□ 2.27
COL13A1-213ENST00000520267 DAGLBQ8NCG7 672 aa29.25■■■□□ 2.27
COL13A1-213ENST00000520267 SAMSN1Q9NSI8 373 aaKnown RBP29.25■■■□□ 2.27
COL13A1-213ENST00000520267 ARL6IP4Q66PJ3 421 aaKnown RBP29.24■■■□□ 2.27
COL13A1-213ENST00000520267 CCDC148Q8NFR7 591 aa29.24■■■□□ 2.27
COL13A1-213ENST00000520267 CEP95Q96GE4 821 aa29.24■■■□□ 2.27
COL13A1-213ENST00000520267 LZTS2Q9BRK4 669 aa29.24■■■□□ 2.27
COL13A1-213ENST00000520267 CCDC194A0A1B0GVG4 234 aa29.24■■■□□ 2.27
COL13A1-213ENST00000520267 IQUBQ8NA54 791 aa29.24■■■□□ 2.27
COL13A1-213ENST00000520267 GSDMAQ96QA5 445 aa29.24■■■□□ 2.27
COL13A1-213ENST00000520267 COA1Q9GZY4 146 aa29.24■■■□□ 2.27
COL13A1-213ENST00000520267 TOP1P11387 765 aaKnown RBP29.23■■■□□ 2.27
COL13A1-213ENST00000520267 CDK11BP21127 795 aaKnown RBP29.23■■■□□ 2.27
COL13A1-213ENST00000520267 USP17L2Q6R6M4 530 aa29.23■■■□□ 2.27
COL13A1-213ENST00000520267 ZNF592Q92610 1267 aa29.23■■■□□ 2.27
COL13A1-213ENST00000520267 PAXBP1Q9Y5B6 917 aa29.23■■■□□ 2.27
COL13A1-213ENST00000520267 F8W031 263 aaPredicted RBP29.23■■■□□ 2.27
COL13A1-213ENST00000520267 PDXDC2PQ6P474 469 aa29.23■■■□□ 2.27
COL13A1-213ENST00000520267 SPZ1Q9BXG8 430 aa29.23■■■□□ 2.27
COL13A1-213ENST00000520267 PARP1P09874 1014 aaKnown RBP29.22■■■□□ 2.27
COL13A1-213ENST00000520267 CUL4BQ13620 913 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 GALNT17Q6IS24 598 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 CERS5Q8N5B7 392 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 SRGNP10124 158 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 LONP1P36776 959 aaKnown RBP29.22■■■□□ 2.27
COL13A1-213ENST00000520267 GOLGA8FQ08AF8 430 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 GOLGA8DPQ0D2H9 430 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 PICALMQ13492 652 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 ZNF710Q8N1W2 664 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 MTRQ99707 1265 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 BLZF1Q9H2G9 400 aa29.22■■■□□ 2.27
COL13A1-213ENST00000520267 CDC25AP30304 524 aa29.21■■■□□ 2.27
COL13A1-213ENST00000520267 INF2Q27J81 1249 aa29.21■■■□□ 2.27
COL13A1-213ENST00000520267 KLHL10Q6JEL2 608 aa29.21■■■□□ 2.27
COL13A1-213ENST00000520267 COL23A1Q86Y22 540 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-213ENST00000520267 SMYD4Q8IYR2 804 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-213ENST00000520267 CT47A1Q5JQC4 288 aaPredicted RBP29.2■■■□□ 2.27
COL13A1-213ENST00000520267 PDCL3Q9H2J4 239 aa29.2■■■□□ 2.27
COL13A1-213ENST00000520267 NRXN2Q9P2S2 1712 aa29.2■■■□□ 2.27
COL13A1-213ENST00000520267 KCNJ6P48051 423 aa29.2■■■□□ 2.26
COL13A1-213ENST00000520267 NOVP48745 357 aa29.2■■■□□ 2.26
COL13A1-213ENST00000520267 MXD3Q9BW11 206 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms