RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 KIF3BO15066 747 aa10.22□□□□□ -0.77
SDCBP-208ENST00000520228 LEFTY1O75610 366 aa10.22□□□□□ -0.77
SDCBP-208ENST00000520228 FBXW10Q5XX13 1052 aa10.22□□□□□ -0.77
SDCBP-208ENST00000520228 INTS3Q68E01 1043 aaKnown RBP10.22□□□□□ -0.77
SDCBP-208ENST00000520228 TOP6BLQ8N6T0 577 aa10.22□□□□□ -0.77
SDCBP-208ENST00000520228 OR6P1Q8NGX9 317 aa10.22□□□□□ -0.77
SDCBP-208ENST00000520228 GIMAP7Q8NHV1 300 aa10.22□□□□□ -0.77
SDCBP-208ENST00000520228 RRP7BPQ9NSQ0 103 aa10.22□□□□□ -0.77
SDCBP-208ENST00000520228 TCOF1Q13428 1488 aaKnown RBP10.22□□□□□ -0.77
SDCBP-208ENST00000520228 INO80Q9ULG1 1556 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-208ENST00000520228 EOMESO95936 686 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 FAM87AP0C7U9 286 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 ACRP10323 421 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 CEBPAP49715 358 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-208ENST00000520228 LETMD1Q6P1Q0 360 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 FAM169BQ8N8A8 192 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 DNAJB8Q8NHS0 232 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 RIN3Q8TB24 985 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 CPLX3Q8WVH0 158 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 SREK1Q8WXA9 508 aaKnown RBP10.21□□□□□ -0.77
SDCBP-208ENST00000520228 CRBNQ96SW2 442 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 TM9SF2Q99805 663 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 TANGO6Q9C0B7 1094 aa10.21□□□□□ -0.77
SDCBP-208ENST00000520228 FAM170BA6NMN3 283 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 RGS13O14921 159 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 SSBP05455 408 aaKnown RBP eCLIP10.2□□□□□ -0.78
SDCBP-208ENST00000520228 DAPK1P53355 1430 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 RUFY4Q6ZNE9 571 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 FBXL6Q8N531 539 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 SHKBP1Q8TBC3 707 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 XAGE3Q8WTP9 111 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 CCDC74BQ96LY2 380 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 MIPEPQ99797 713 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 SIGLEC1Q9BZZ2 1709 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 PTPN23Q9H3S7 1636 aa10.2□□□□□ -0.78
SDCBP-208ENST00000520228 MADDQ8WXG6 1647 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 ITGB7P26010 798 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 ETFBP38117 255 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 SF3A1Q15459 793 aaKnown RBP10.19□□□□□ -0.78
SDCBP-208ENST00000520228 ZDHHC13Q8IUH4 622 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 SLC9A7Q96T83 725 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 KIF2CQ99661 725 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 ZNF408Q9H9D4 720 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 CEP131Q9UPN4 1083 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 MRVI1Q9Y6F6 885 aa10.19□□□□□ -0.78
SDCBP-208ENST00000520228 CNTLNQ9NXG0 1405 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 ANKRD30AQ9BXX3 1397 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 KIF15Q9NS87 1388 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 CNTNAP4Q9C0A0 1308 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 UBOX5O94941 541 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 RAG1P15918 1043 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 CCNFP41002 786 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 CYP27A1Q02318 531 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 PRSS36Q5K4E3 855 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 ZNF765Q7L2R6 523 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 C19orf47Q8N9M1 422 aaKnown RBP10.18□□□□□ -0.78
SDCBP-208ENST00000520228 BAHD1Q8TBE0 780 aaPredicted RBP10.18□□□□□ -0.78
SDCBP-208ENST00000520228 ANAPC16Q96DE5 110 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 SEMA6BQ9H3T3 888 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
SDCBP-208ENST00000520228 SHANK2Q9UPX8 1470 aa10.17□□□□□ -0.78
SDCBP-208ENST00000520228 WASHC2CQ9Y4E1 1318 aa10.17□□□□□ -0.78
SDCBP-208ENST00000520228 ATP2B1P20020 1258 aa10.17□□□□□ -0.78
SDCBP-208ENST00000520228 GUCY2CP25092 1073 aa10.17□□□□□ -0.78
SDCBP-208ENST00000520228 POLR2BP30876 1174 aaKnown RBP10.17□□□□□ -0.78
SDCBP-208ENST00000520228 CASP7P55210 303 aa10.17□□□□□ -0.78
SDCBP-208ENST00000520228 CPSF6Q16630 551 aaKnown RBP eCLIP10.17□□□□□ -0.78
SDCBP-208ENST00000520228 PHACTR4Q8IZ21 702 aa10.17□□□□□ -0.78
SDCBP-208ENST00000520228 ARMC5Q96C12 935 aa10.17□□□□□ -0.78
SDCBP-208ENST00000520228 HEXIM2Q96MH2 286 aaKnown RBP10.17□□□□□ -0.78
SDCBP-208ENST00000520228 ZMYM3Q14202 1370 aa10.16□□□□□ -0.78
SDCBP-208ENST00000520228 PRR19A6NJB7 356 aa10.16□□□□□ -0.78
SDCBP-208ENST00000520228 WDR64B1ANS9 1081 aa10.16□□□□□ -0.78
SDCBP-208ENST00000520228 CYP27C1Q4G0S4 372 aa10.16□□□□□ -0.78
SDCBP-208ENST00000520228 METTL22Q9BUU2 404 aaPredicted RBP10.16□□□□□ -0.78
SDCBP-208ENST00000520228 MAST1Q9Y2H9 1570 aa10.16□□□□□ -0.78
SDCBP-208ENST00000520228 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
SDCBP-208ENST00000520228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.15□□□□□ -0.78
SDCBP-208ENST00000520228 ZYXQ15942 572 aaKnown RBP10.15□□□□□ -0.78
SDCBP-208ENST00000520228 CDH24Q86UP0 819 aa10.15□□□□□ -0.78
SDCBP-208ENST00000520228 VWCEQ96DN2 955 aa10.15□□□□□ -0.78
SDCBP-208ENST00000520228 PRKAG3Q9UGI9 489 aa10.15□□□□□ -0.78
SDCBP-208ENST00000520228 A0A1W2PQH9 124 aa10.14□□□□□ -0.79
SDCBP-208ENST00000520228 IGF2BP3O00425 579 aaKnown RBP eCLIP10.14□□□□□ -0.79
SDCBP-208ENST00000520228 DUSP27Q5VZP5 1158 aa10.14□□□□□ -0.79
SDCBP-208ENST00000520228 ZNF746Q6NUN9 644 aaPredicted RBP10.14□□□□□ -0.79
SDCBP-208ENST00000520228 UNC5AQ6ZN44 842 aa10.14□□□□□ -0.79
SDCBP-208ENST00000520228 TTC6Q86TZ1 520 aa10.14□□□□□ -0.79
SDCBP-208ENST00000520228 ATG3Q9NT62 314 aa10.14□□□□□ -0.79
SDCBP-208ENST00000520228 RIMS1Q86UR5 1692 aaKnown RBP10.14□□□□□ -0.79
SDCBP-208ENST00000520228 DUOX2Q9NRD8 1548 aa10.13□□□□□ -0.79
SDCBP-208ENST00000520228 ADGBQ8N7X0 1667 aa10.13□□□□□ -0.79
SDCBP-208ENST00000520228 RBAK-RBAKDNI3L0D1 243 aa10.13□□□□□ -0.79
SDCBP-208ENST00000520228 SMAD7O15105 426 aaKnown RBP10.13□□□□□ -0.79
SDCBP-208ENST00000520228 GBP1P32455 592 aa10.13□□□□□ -0.79
SDCBP-208ENST00000520228 ETV3P41162 512 aa10.13□□□□□ -0.79
SDCBP-208ENST00000520228 TMEM192Q8IY95 271 aa10.13□□□□□ -0.79
SDCBP-208ENST00000520228 DRC1Q96MC2 740 aa10.13□□□□□ -0.79
SDCBP-208ENST00000520228 OSBPL1AQ9BXW6 950 aa10.13□□□□□ -0.79
SDCBP-208ENST00000520228 TNKS2Q9H2K2 1166 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms