RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 PLXNA1Q9UIW2 1896 aa24.11■■□□□ 1.45
HDAC2-207ENST00000520170 WDR46O15213 610 aaKnown RBP24.1■■□□□ 1.45
HDAC2-207ENST00000520170 FCER1AP12319 257 aa24.1■■□□□ 1.45
HDAC2-207ENST00000520170 ABRAQ8N0Z2 381 aa24.1■■□□□ 1.45
HDAC2-207ENST00000520170 SLC4A4Q9Y6R1 1079 aa24.1■■□□□ 1.45
HDAC2-207ENST00000520170 EEF2P13639 858 aaKnown RBP24.09■■□□□ 1.45
HDAC2-207ENST00000520170 TMEM132BQ14DG7 1078 aa24.09■■□□□ 1.45
HDAC2-207ENST00000520170 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
HDAC2-207ENST00000520170 SLC39A5Q6ZMH5 540 aa24.09■■□□□ 1.45
HDAC2-207ENST00000520170 C16orf86Q6ZW13 317 aa24.09■■□□□ 1.45
HDAC2-207ENST00000520170 MAML3Q96JK9 1138 aa24.09■■□□□ 1.45
HDAC2-207ENST00000520170 LTBP2Q14767 1821 aa24.09■■□□□ 1.45
HDAC2-207ENST00000520170 RAD21O60216 631 aa24.08■■□□□ 1.45
HDAC2-207ENST00000520170 UBE3CQ15386 1083 aa24.08■■□□□ 1.45
HDAC2-207ENST00000520170 FBXO28Q9NVF7 368 aa24.08■■□□□ 1.45
HDAC2-207ENST00000520170 SLC25A27O95847 323 aa24.07■■□□□ 1.44
HDAC2-207ENST00000520170 ADCYAP1R1P41586 468 aa24.07■■□□□ 1.44
HDAC2-207ENST00000520170 CTR9Q6PD62 1173 aa24.07■■□□□ 1.44
HDAC2-207ENST00000520170 FERMT2Q96AC1 680 aa24.07■■□□□ 1.44
HDAC2-207ENST00000520170 MMP19Q99542 508 aa24.07■■□□□ 1.44
HDAC2-207ENST00000520170 KANSL2Q9H9L4 492 aa24.07■■□□□ 1.44
HDAC2-207ENST00000520170 PRDM5Q9NQX1 630 aaPredicted RBP24.07■■□□□ 1.44
HDAC2-207ENST00000520170 LRRC41Q15345 812 aa24.06■■□□□ 1.44
HDAC2-207ENST00000520170 PUS7LQ9H0K6 701 aaKnown RBP24.06■■□□□ 1.44
HDAC2-207ENST00000520170 CHMP4BQ9H444 224 aaKnown RBP24.06■■□□□ 1.44
HDAC2-207ENST00000520170 GOPCQ9HD26 462 aa24.06■■□□□ 1.44
HDAC2-207ENST00000520170 ADAMTS5Q9UNA0 930 aa24.06■■□□□ 1.44
HDAC2-207ENST00000520170 PGK2P07205 417 aa24.05■■□□□ 1.44
HDAC2-207ENST00000520170 TRIM60Q495X7 471 aa24.05■■□□□ 1.44
HDAC2-207ENST00000520170 FAM47AQ5JRC9 791 aa24.05■■□□□ 1.44
HDAC2-207ENST00000520170 ZSCAN25Q6NSZ9 544 aa24.05■■□□□ 1.44
HDAC2-207ENST00000520170 POTEB2H3BUK9 544 aa24.04■■□□□ 1.44
HDAC2-207ENST00000520170 SMARCA5O60264 1052 aaPredicted RBP24.04■■□□□ 1.44
HDAC2-207ENST00000520170 FAM83BQ5T0W9 1011 aa24.04■■□□□ 1.44
HDAC2-207ENST00000520170 RIOX2Q8IUF8 465 aa24.04■■□□□ 1.44
HDAC2-207ENST00000520170 STK11IPQ8N1F8 1099 aa24.04■■□□□ 1.44
HDAC2-207ENST00000520170 FAM161BQ96MY7 647 aa24.04■■□□□ 1.44
HDAC2-207ENST00000520170 LRRCC1Q9C099 1032 aa24.04■■□□□ 1.44
HDAC2-207ENST00000520170 UNC80Q8N2C7 3258 aa24.03■■□□□ 1.44
HDAC2-207ENST00000520170 VWA5AO00534 786 aa24.03■■□□□ 1.44
HDAC2-207ENST00000520170 STAT3P40763 770 aa24.03■■□□□ 1.44
HDAC2-207ENST00000520170 KCTD2Q14681 263 aa24.03■■□□□ 1.44
HDAC2-207ENST00000520170 PPP1R9AQ9ULJ8 1098 aa24.03■■□□□ 1.44
HDAC2-207ENST00000520170 CUL9Q8IWT3 2517 aa24.02■■□□□ 1.44
HDAC2-207ENST00000520170 SNX17Q15036 470 aa24.02■■□□□ 1.44
HDAC2-207ENST00000520170 SHHQ15465 462 aa24.02■■□□□ 1.44
HDAC2-207ENST00000520170 FAM109BQ6ICB4 259 aaPredicted RBP24.02■■□□□ 1.44
HDAC2-207ENST00000520170 BADQ92934 168 aa24.02■■□□□ 1.44
HDAC2-207ENST00000520170 XPNPEP3Q9NQH7 507 aa24.02■■□□□ 1.44
HDAC2-207ENST00000520170 RARBP10826 455 aa24.01■■□□□ 1.43
HDAC2-207ENST00000520170 SH3RF1Q7Z6J0 888 aa24.01■■□□□ 1.43
HDAC2-207ENST00000520170 TINF2Q9BSI4 451 aa24.01■■□□□ 1.43
HDAC2-207ENST00000520170 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.01■■□□□ 1.43
HDAC2-207ENST00000520170 ARPP21Q9UBL0 812 aaPredicted RBP24.01■■□□□ 1.43
HDAC2-207ENST00000520170 RCAN3Q9UKA8 241 aa24.01■■□□□ 1.43
HDAC2-207ENST00000520170 ZNF214Q9UL59 606 aaPredicted RBP24.01■■□□□ 1.43
HDAC2-207ENST00000520170 MYH4Q9Y623 1939 aa24.01■■□□□ 1.43
HDAC2-207ENST00000520170 GREB1LQ9C091 1923 aaPredicted RBP24■■□□□ 1.43
HDAC2-207ENST00000520170 PGK1P00558 417 aa24■■□□□ 1.43
HDAC2-207ENST00000520170 TAL1P17542 331 aaPredicted RBP24■■□□□ 1.43
HDAC2-207ENST00000520170 ZNF792Q3KQV3 632 aa24■■□□□ 1.43
HDAC2-207ENST00000520170 C9orf50Q5SZB4 431 aa24■■□□□ 1.43
HDAC2-207ENST00000520170 GUCD1Q96NT3 240 aa24■■□□□ 1.43
HDAC2-207ENST00000520170 STRBPQ96SI9 672 aaKnown RBP24■■□□□ 1.43
HDAC2-207ENST00000520170 NUP88Q99567 741 aaPredicted RBP24■■□□□ 1.43
HDAC2-207ENST00000520170 MKNK2Q9HBH9 465 aa24■■□□□ 1.43
HDAC2-207ENST00000520170 PDLIM7Q9NR12 457 aa24■■□□□ 1.43
HDAC2-207ENST00000520170 NRBP1Q9UHY1 535 aa24■■□□□ 1.43
HDAC2-207ENST00000520170 DIS3Q9Y2L1 958 aaKnown RBP24■■□□□ 1.43
HDAC2-207ENST00000520170 MINDY4BA8MYZ0 360 aa23.99■■□□□ 1.43
HDAC2-207ENST00000520170 TLE2Q04725 743 aa23.99■■□□□ 1.43
HDAC2-207ENST00000520170 ZNF697Q5TEC3 545 aa23.99■■□□□ 1.43
HDAC2-207ENST00000520170 REPS2Q8NFH8 660 aa23.99■■□□□ 1.43
HDAC2-207ENST00000520170 PHF24Q9UPV7 400 aa23.99■■□□□ 1.43
HDAC2-207ENST00000520170 TRIM43BA6NCK2 446 aa23.98■■□□□ 1.43
HDAC2-207ENST00000520170 RASA1P20936 1047 aa23.98■■□□□ 1.43
HDAC2-207ENST00000520170 COPB2P35606 906 aa23.98■■□□□ 1.43
HDAC2-207ENST00000520170 C20orf194Q5TEA3 1177 aa23.98■■□□□ 1.43
HDAC2-207ENST00000520170 RNF180Q86T96 592 aa23.98■■□□□ 1.43
HDAC2-207ENST00000520170 TRIM43Q96BQ3 446 aaPredicted RBP23.98■■□□□ 1.43
HDAC2-207ENST00000520170 ECHDC1Q9NTX5 307 aa23.98■■□□□ 1.43
HDAC2-207ENST00000520170 GSG1L2A8MUP6 293 aa23.97■■□□□ 1.43
HDAC2-207ENST00000520170 SLC4A3P48751 1232 aa23.97■■□□□ 1.43
HDAC2-207ENST00000520170 SBK1Q52WX2 424 aa23.97■■□□□ 1.43
HDAC2-207ENST00000520170 C1orf53Q5VUE5 145 aa23.97■■□□□ 1.43
HDAC2-207ENST00000520170 SLF1Q9BQI6 1058 aa23.97■■□□□ 1.43
HDAC2-207ENST00000520170 MCM3APO60318 1980 aa23.96■■□□□ 1.43
HDAC2-207ENST00000520170 F5H6K3 240 aa23.96■■□□□ 1.43
HDAC2-207ENST00000520170 ZNF865P0CJ78 1059 aaPredicted RBP23.96■■□□□ 1.43
HDAC2-207ENST00000520170 KLRC3Q07444 240 aa23.96■■□□□ 1.43
HDAC2-207ENST00000520170 SNRNP48Q6IEG0 339 aaKnown RBP23.96■■□□□ 1.43
HDAC2-207ENST00000520170 LENG1Q96BZ8 264 aaPredicted RBP23.96■■□□□ 1.43
HDAC2-207ENST00000520170 CNPY2Q9Y2B0 182 aa23.96■■□□□ 1.43
HDAC2-207ENST00000520170 EYSQ5T1H1 3165 aa23.96■■□□□ 1.43
HDAC2-207ENST00000520170 NDUFB10O96000 172 aa23.95■■□□□ 1.42
HDAC2-207ENST00000520170 AKR1A1P14550 325 aa23.95■■□□□ 1.42
HDAC2-207ENST00000520170 KBTBD3Q8NAB2 608 aa23.95■■□□□ 1.42
HDAC2-207ENST00000520170 OSBP2Q969R2 916 aa23.95■■□□□ 1.42
HDAC2-207ENST00000520170 DDX11Q96FC9 970 aa23.95■■□□□ 1.42
HDAC2-207ENST00000520170 TEX13BQ9BXU2 312 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms