RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CYBAP13498 195 aa14.89□□□□□ -0.03
CSMD1-205ENST00000519623 GNAT2P19087 354 aa14.89□□□□□ -0.03
CSMD1-205ENST00000519623 BMP8BP34820 402 aa14.89□□□□□ -0.03
CSMD1-205ENST00000519623 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
CSMD1-205ENST00000519623 NCAPG2Q86XI2 1143 aa14.89□□□□□ -0.03
CSMD1-205ENST00000519623 SEC62Q99442 399 aaKnown RBP14.89□□□□□ -0.03
CSMD1-205ENST00000519623 MKNK2Q9HBH9 465 aa14.89□□□□□ -0.03
CSMD1-205ENST00000519623 GOPCQ9HD26 462 aa14.89□□□□□ -0.03
CSMD1-205ENST00000519623 NYAP2Q9P242 653 aa14.89□□□□□ -0.03
CSMD1-205ENST00000519623 COL11A1P12107 1806 aaPredicted RBP14.89□□□□□ -0.03
CSMD1-205ENST00000519623 ZNF236Q9UL36 1845 aa14.89□□□□□ -0.03
CSMD1-205ENST00000519623 ROBO3Q96MS0 1386 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 FRMPD3Q5JV73 1810 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 IGKV6D-41A0A0C4DH26 115 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 VWA5AO00534 786 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 ERC2O15083 957 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 MSCO60682 206 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 SLC25A27O95847 323 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 CNGA1P29973 690 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 RRP1P56182 461 aaKnown RBP14.88□□□□□ -0.03
CSMD1-205ENST00000519623 LRRC26Q2I0M4 334 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 FAM83BQ5T0W9 1011 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 IFNL3Q8IZI9 196 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 REPS2Q8NFH8 660 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 PPP1R9AQ9ULJ8 1098 aa14.88□□□□□ -0.03
CSMD1-205ENST00000519623 F5H6K3 240 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 APPP05067 770 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 FCER1AP12319 257 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 SYN1P17600 705 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 STAT3P40763 770 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 KLRC3Q07444 240 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 LRRFIP1Q32MZ4 808 aaKnown RBP14.87□□□□□ -0.03
CSMD1-205ENST00000519623 ZMYM1Q5SVZ6 1142 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 RIOX2Q8IUF8 465 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 MKL1Q969V6 931 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 SLC5A4Q9NY91 659 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 ZNF214Q9UL59 606 aaPredicted RBP14.87□□□□□ -0.03
CSMD1-205ENST00000519623 SALL3Q9BXA9 1300 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
CSMD1-205ENST00000519623 SOX1O00570 391 aaPredicted RBP14.86□□□□□ -0.03
CSMD1-205ENST00000519623 RAD21O60216 631 aa14.86□□□□□ -0.03
CSMD1-205ENST00000519623 PRDM1O75626 825 aa14.86□□□□□ -0.03
CSMD1-205ENST00000519623 MX1P20591 662 aa14.86□□□□□ -0.03
CSMD1-205ENST00000519623 TDO2P48775 406 aa14.86□□□□□ -0.03
CSMD1-205ENST00000519623 PRAMEF19Q5SWL8 479 aa14.86□□□□□ -0.03
CSMD1-205ENST00000519623 MAML3Q96JK9 1138 aa14.86□□□□□ -0.03
CSMD1-205ENST00000519623 NUP88Q99567 741 aaPredicted RBP14.86□□□□□ -0.03
CSMD1-205ENST00000519623 SENP6Q9GZR1 1112 aaPredicted RBP14.86□□□□□ -0.03
CSMD1-205ENST00000519623 CLIP2Q9UDT6 1046 aa14.86□□□□□ -0.03
CSMD1-205ENST00000519623 SEPT4O43236 478 aa14.85□□□□□ -0.03
CSMD1-205ENST00000519623 NDUFB10O96000 172 aa14.85□□□□□ -0.03
CSMD1-205ENST00000519623 MAGEA10P43363 369 aaPredicted RBP14.85□□□□□ -0.03
CSMD1-205ENST00000519623 ZNF444Q8N0Y2 327 aaPredicted RBP14.85□□□□□ -0.03
CSMD1-205ENST00000519623 CRBNQ96SW2 442 aa14.85□□□□□ -0.03
CSMD1-205ENST00000519623 MTMR4Q9NYA4 1195 aa14.85□□□□□ -0.03
CSMD1-205ENST00000519623 LAMA3Q16787 3333 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 DNM1LO00429 736 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 PGK2P07205 417 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 ZNF792Q3KQV3 632 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 GJC2Q5T442 439 aaPredicted RBP14.84□□□□□ -0.03
CSMD1-205ENST00000519623 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 ANO1Q5XXA6 986 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 PRPF38AQ8NAV1 312 aaKnown RBP14.84□□□□□ -0.03
CSMD1-205ENST00000519623 CEP95Q96GE4 821 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 MMP19Q99542 508 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 SLF1Q9BQI6 1058 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 FSD1Q9BTV5 496 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 NACAP1Q9BZK3 213 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 ZNF287Q9HBT7 754 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 DIS3Q9Y2L1 958 aaKnown RBP14.84□□□□□ -0.03
CSMD1-205ENST00000519623 MYH4Q9Y623 1939 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 DNAH12Q6ZR08 3092 aa14.84□□□□□ -0.03
CSMD1-205ENST00000519623 FOXP2O15409 715 aa14.83□□□□□ -0.04
CSMD1-205ENST00000519623 ARRDC4Q8NCT1 418 aa14.83□□□□□ -0.04
CSMD1-205ENST00000519623 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.04
CSMD1-205ENST00000519623 LRCH3Q96II8 777 aa14.83□□□□□ -0.04
CSMD1-205ENST00000519623 RIPK3Q9Y572 518 aa14.83□□□□□ -0.04
CSMD1-205ENST00000519623 ATP2A1O14983 1001 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 TTLL1O95922 423 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 COPB2P35606 906 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 ATN1P54259 1190 aaPredicted RBP14.82□□□□□ -0.04
CSMD1-205ENST00000519623 PPARAQ07869 468 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
CSMD1-205ENST00000519623 KCTD2Q14681 263 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 FAM47AQ5JRC9 791 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 TINF2Q9BSI4 451 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 NAPBQ9H115 298 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 NRBP1Q9UHY1 535 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 SYNPO2Q9UMS6 1093 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 PLXNA1Q9UIW2 1896 aa14.82□□□□□ -0.04
CSMD1-205ENST00000519623 TAL1P17542 331 aaPredicted RBP14.81□□□□□ -0.04
CSMD1-205ENST00000519623 TFAP4Q01664 338 aa14.81□□□□□ -0.04
CSMD1-205ENST00000519623 PDE4BQ07343 736 aa14.81□□□□□ -0.04
CSMD1-205ENST00000519623 SNRNP48Q6IEG0 339 aaKnown RBP14.81□□□□□ -0.04
CSMD1-205ENST00000519623 SLC39A5Q6ZMH5 540 aa14.81□□□□□ -0.04
CSMD1-205ENST00000519623 CCDC129Q6ZRS4 1044 aa14.81□□□□□ -0.04
CSMD1-205ENST00000519623 GMCL1P1Q8NEA9 526 aa14.81□□□□□ -0.04
CSMD1-205ENST00000519623 TEX13BQ9BXU2 312 aa14.81□□□□□ -0.04
CSMD1-205ENST00000519623 UBE2OQ9C0C9 1292 aaKnown RBP14.81□□□□□ -0.04
CSMD1-205ENST00000519623 INCENPQ9NQS7 918 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms