RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 NOL9Q5SY16 702 aaKnown RBP17.27■□□□□ 0.36
PABPC1-210ENST00000519363 BRAPQ7Z569 592 aa17.27■□□□□ 0.36
PABPC1-210ENST00000519363 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
PABPC1-210ENST00000519363 FERMT3Q86UX7 667 aa17.27■□□□□ 0.36
PABPC1-210ENST00000519363 GOPCQ9HD26 462 aa17.27■□□□□ 0.36
PABPC1-210ENST00000519363 SH3GLB2Q9NR46 395 aa17.27■□□□□ 0.36
PABPC1-210ENST00000519363 MTMR7Q9Y216 660 aa17.27■□□□□ 0.36
PABPC1-210ENST00000519363 F5H6K3 240 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 hCG_1984214I3L0E3 225 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 NDUFB10O96000 172 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 MMP1P03956 469 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 SLC1A4P43007 532 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 GUCY1B3Q02153 619 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 KLRC3Q07444 240 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 CCDC96Q2M329 555 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 KRT26Q7Z3Y9 468 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 SCYL3Q8IZE3 742 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 ZNF713Q8N859 430 aaPredicted RBP17.26■□□□□ 0.35
PABPC1-210ENST00000519363 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
PABPC1-210ENST00000519363 FRMPD2Q68DX3 1309 aaPredicted RBP17.25■□□□□ 0.35
PABPC1-210ENST00000519363 ADM5C9JUS6 153 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 SAFBQ15424 915 aaKnown RBP eCLIP17.25■□□□□ 0.35
PABPC1-210ENST00000519363 ATL3Q6DD88 541 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 TMEM87AQ8NBN3 555 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 ACER1Q8TDN7 264 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 RRP36Q96EU6 259 aaKnown RBP17.25■□□□□ 0.35
PABPC1-210ENST00000519363 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 GJB4Q9NTQ9 266 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 PTPRFP10586 1907 aa17.25■□□□□ 0.35
PABPC1-210ENST00000519363 PARP14Q460N5 1801 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 U2AF2P26368 475 aaKnown RBP eCLIP17.24■□□□□ 0.35
PABPC1-210ENST00000519363 INPP5BP32019 993 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 ECE1P42892 770 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 PRAMEF18Q5VWM3 479 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 MCTP1Q6DN14 999 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 BTNL9Q6UXG8 535 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 CCDC148Q8NFR7 591 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.24■□□□□ 0.351e-323■■■□□ 15.3
PABPC1-210ENST00000519363 SHISA4Q96DD7 197 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 MTMR8Q96EF0 704 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 WDR18Q9BV38 432 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 PHF20Q9BVI0 1012 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 KIAA1683Q9H0B3 1180 aa17.24■□□□□ 0.35
PABPC1-210ENST00000519363 FOXP1Q9H334 677 aaPredicted RBP17.24■□□□□ 0.35
PABPC1-210ENST00000519363 SEC63Q9UGP8 760 aaKnown RBP17.24■□□□□ 0.35
PABPC1-210ENST00000519363 hCG_1642624A0A1W2PR95 340 aa17.23■□□□□ 0.35
PABPC1-210ENST00000519363 BMP3P12645 472 aa17.23■□□□□ 0.35
PABPC1-210ENST00000519363 KRT85P78386 507 aa17.23■□□□□ 0.35
PABPC1-210ENST00000519363 KCTD1Q719H9 257 aa17.23■□□□□ 0.35
PABPC1-210ENST00000519363 CDCA5Q96FF9 252 aa17.23■□□□□ 0.35
PABPC1-210ENST00000519363 GPCPD1Q9NPB8 672 aa17.23■□□□□ 0.35
PABPC1-210ENST00000519363 BARHL2Q9NY43 387 aa17.23■□□□□ 0.35
PABPC1-210ENST00000519363 VPS54Q9P1Q0 977 aa17.23■□□□□ 0.35
PABPC1-210ENST00000519363 KIF28PB7ZC32 967 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 PPP1R12BO60237 982 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-210ENST00000519363 PLA2G6O60733 806 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 USP2O75604 605 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-210ENST00000519363 CALML3P27482 149 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 NF2P35240 595 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 DNM1Q05193 864 aaKnown RBP17.22■□□□□ 0.35
PABPC1-210ENST00000519363 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 WWC2Q6AWC2 1192 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 GALNT17Q6IS24 598 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 PPP1R18Q6NYC8 613 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 DIS3L2Q8IYB7 885 aaKnown RBP17.22■□□□□ 0.35
PABPC1-210ENST00000519363 ADGRF4Q8IZF3 695 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-210ENST00000519363 LPAR1Q92633 364 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 PIGSQ96S52 555 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 UBA5Q9GZZ9 404 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 JMJD4Q9H9V9 463 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 AS3MTQ9HBK9 375 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 BRMS1Q9HCU9 246 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-210ENST00000519363 KCNJ14Q9UNX9 436 aa17.22■□□□□ 0.35
PABPC1-210ENST00000519363 ELP1O95163 1332 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 LOC285556D6RIA3 1793 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 STXBP3O00186 592 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 PTPRAP18433 802 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 NPY5RQ15761 445 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 EAPPQ56P03 285 aaPredicted RBP17.21■□□□□ 0.35
PABPC1-210ENST00000519363 MYSM1Q5VVJ2 828 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 TTBK2Q6IQ55 1244 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 DAGLBQ8NCG7 672 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 CHAMP1Q96JM3 812 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
PABPC1-210ENST00000519363 FEZ1Q99689 392 aa17.21■□□□□ 0.35
PABPC1-210ENST00000519363 GLIS2Q9BZE0 524 aaPredicted RBP17.21■□□□□ 0.35
PABPC1-210ENST00000519363 PNMA6FA0A0J9YX94 578 aa17.2■□□□□ 0.34
PABPC1-210ENST00000519363 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
PABPC1-210ENST00000519363 ZBTB5O15062 677 aa17.2■□□□□ 0.34
PABPC1-210ENST00000519363 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
PABPC1-210ENST00000519363 RAD21O60216 631 aa17.2■□□□□ 0.34
PABPC1-210ENST00000519363 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
PABPC1-210ENST00000519363 KRT2P35908 639 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms