RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 MORN1Q5T089 497 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 CENPQQ7L2Z9 268 aaPredicted RBP15.78■□□□□ 0.12
VEGFA-219ENST00000518824 NBPF11Q86T75 865 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 USP6NLQ92738 828 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 TOMM22Q9NS69 142 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 HOXC10Q9NYD6 342 aa15.78■□□□□ 0.12
VEGFA-219ENST00000518824 BRCA2P51587 3418 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 INHAP05111 366 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 MAPK4P31152 587 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 AKNAD1Q5T1N1 836 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 WDR78Q5VTH9 848 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 PLEKHH3Q7Z736 793 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 SLAIN1Q8ND83 568 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 REPS2Q8NFH8 660 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 STAG1Q8WVM7 1258 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 TRIB2Q92519 343 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 DSCC1Q9BVC3 393 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 SPATC1LQ9H0A9 340 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 UNC93B1Q9H1C4 597 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 BIN2Q9UBW5 565 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-219ENST00000518824 PPP1R9AQ9ULJ8 1098 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 ADAMTS5Q9UNA0 930 aa15.77■□□□□ 0.12
VEGFA-219ENST00000518824 CCL5P13501 91 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 NOVP48745 357 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 MFAP1P55081 439 aaKnown RBP15.76■□□□□ 0.11
VEGFA-219ENST00000518824 MLLT1Q03111 559 aaPredicted RBP15.76■□□□□ 0.11
VEGFA-219ENST00000518824 PLS1Q14651 629 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 SLFN13Q68D06 897 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 PXYLP1Q8TE99 480 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 SHISA4Q96DD7 197 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 STX8Q9UNK0 236 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 MTMR7Q9Y216 660 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 TAF6LQ9Y6J9 622 aa15.76■□□□□ 0.11
VEGFA-219ENST00000518824 VWA5AO00534 786 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 ERCC3P19447 782 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 PTPREP23469 700 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 RCSD1Q6JBY9 416 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 MFSD6Q6ZSS7 791 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 CCAR1Q8IX12 1150 aaKnown RBP15.75■□□□□ 0.11
VEGFA-219ENST00000518824 GMCL1P1Q8NEA9 526 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 NPLOC4Q8TAT6 608 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 NUDT12Q9BQG2 462 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 ZKSCAN3Q9BRR0 538 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 FLRT1Q9NZU1 646 aa15.75■□□□□ 0.11
VEGFA-219ENST00000518824 B4E1Z4 1266 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 ZNF213O14771 459 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 SGSM2O43147 1006 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 MCCP23508 829 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 CCNA1P78396 465 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 KCTD1Q719H9 257 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 SLF1Q9BQI6 1058 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 TMEM106CQ9BVX2 250 aa15.74■□□□□ 0.11
VEGFA-219ENST00000518824 ZNF214Q9UL59 606 aaPredicted RBP15.74■□□□□ 0.11
VEGFA-219ENST00000518824 TNRC18O15417 2968 aaPredicted RBP15.74■□□□□ 0.11
VEGFA-219ENST00000518824 ZNFX1Q9P2E3 1918 aaKnown RBP15.74■□□□□ 0.11
VEGFA-219ENST00000518824 BMP3P12645 472 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 SNAP25P60880 206 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 MAP2K5Q13163 448 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 GRB14Q14449 540 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 NCAPG2Q86XI2 1143 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 MB21D1Q8N884 522 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 KIFC2Q96AC6 838 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 TMEM47Q9BQJ4 181 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 RNF208Q9H0X6 261 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 CWC22Q9HCG8 908 aaKnown RBP15.73■□□□□ 0.11
VEGFA-219ENST00000518824 RIPK3Q9Y572 518 aa15.73■□□□□ 0.11
VEGFA-219ENST00000518824 RAD50Q92878 1312 aa15.72■□□□□ 0.11
VEGFA-219ENST00000518824 SLC15A5A6NIM6 579 aa15.72■□□□□ 0.11
VEGFA-219ENST00000518824 TMEM232C9JQI7 657 aa15.72■□□□□ 0.11
VEGFA-219ENST00000518824 COBLO75128 1261 aa15.72■□□□□ 0.11
VEGFA-219ENST00000518824 KDM4AO75164 1064 aa15.72■□□□□ 0.11
VEGFA-219ENST00000518824 TAL1P17542 331 aaPredicted RBP15.72■□□□□ 0.11
VEGFA-219ENST00000518824 UBXN2AP68543 259 aa15.72■□□□□ 0.11
VEGFA-219ENST00000518824 TTBK2Q6IQ55 1244 aa15.72■□□□□ 0.11
VEGFA-219ENST00000518824 TCP11L1Q9NUJ3 509 aa15.72■□□□□ 0.11
VEGFA-219ENST00000518824 HMGCRP04035 888 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 CYP21A2P08686 494 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 XRCC5P13010 732 aaKnown RBP15.71■□□□□ 0.11
VEGFA-219ENST00000518824 ADORA2AP29274 412 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 STAT3P40763 770 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 RGS2P41220 211 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 IMMTQ16891 758 aaKnown RBP15.71■□□□□ 0.11
VEGFA-219ENST00000518824 RIOX2Q8IUF8 465 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 CPXCR1Q8N123 301 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 PRPF38AQ8NAV1 312 aaKnown RBP15.71■□□□□ 0.11
VEGFA-219ENST00000518824 SHCBP1Q8NEM2 672 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 GMCL1Q96IK5 515 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 APBA2Q99767 749 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 RAVER2Q9HCJ3 691 aaKnown RBP15.71■□□□□ 0.11
VEGFA-219ENST00000518824 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.11
VEGFA-219ENST00000518824 SYNPO2Q9UMS6 1093 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 SMCHD1A6NHR9 2005 aa15.71■□□□□ 0.11
VEGFA-219ENST00000518824 ZNF236Q9UL36 1845 aa15.71■□□□□ 0.1
VEGFA-219ENST00000518824 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-219ENST00000518824 GJB1P08034 283 aa15.7■□□□□ 0.1
VEGFA-219ENST00000518824 TOP1P11387 765 aaKnown RBP15.7■□□□□ 0.1
VEGFA-219ENST00000518824 CCND3P30281 292 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-219ENST00000518824 SLC1A4P43007 532 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms