RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 FAM129CQ86XR2 697 aa3.2□□□□□ -1.9
RNU6-561P-201ENST00000516222 SHISA4Q96DD7 197 aa3.2□□□□□ -1.9
RNU6-561P-201ENST00000516222 CCDC74BQ96LY2 380 aa3.2□□□□□ -1.9
RNU6-561P-201ENST00000516222 ADAM7Q9H2U9 754 aa3.2□□□□□ -1.9
RNU6-561P-201ENST00000516222 CNTD2Q9H8S5 307 aa3.2□□□□□ -1.9
RNU6-561P-201ENST00000516222 A0A1W2PQ27 194 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 A0A1W2PQ64 194 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 A0A1W2PQC6 194 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 A0A1W2PQD8 194 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 WTIPA6NIX2 430 aaPredicted RBP3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 SUV39H1O43463 412 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 EIF4BP23588 611 aaKnown RBP3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 GBP1P32455 592 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 CDK8P49336 464 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 GALK1P51570 392 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 EPHB3P54753 998 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 RTP1P59025 263 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 SEPT6Q14141 434 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 RAB3GAP1Q15042 981 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 ZFYVE27Q5T4F4 411 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 AGMOQ6ZNB7 445 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 LDHDQ86WU2 507 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 ZNF655Q8N720 491 aaPredicted RBP3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 SYT8Q8NBV8 401 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 JARID2Q92833 1246 aaPredicted RBP3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 ACSF2Q96CM8 615 aaPredicted RBP3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 TNFRSF10DQ9UBN6 386 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 SRRDQ9UH36 339 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 TAF6LQ9Y6J9 622 aa3.19□□□□□ -1.9
RNU6-561P-201ENST00000516222 IRS4O14654 1257 aaPredicted RBP3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 BUB1BO60566 1050 aaPredicted RBP3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 LRRN2O75325 713 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 USP2O75604 605 aaPredicted RBP3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 ERVFRD-1P60508 538 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 RNF4P78317 190 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 CAP1Q01518 475 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 NMIQ13287 307 aaPredicted RBP3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 TARBP2Q15633 366 aaKnown RBP3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 HHIPL2Q6UWX4 724 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 TMC6Q7Z403 805 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 AEBP1Q8IUX7 1158 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 SLFN12Q8IYM2 578 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 PHACTR4Q8IZ21 702 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 DAGLBQ8NCG7 672 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 SYTL5Q8TDW5 730 aaPredicted RBP3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 MAP6Q96JE9 813 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 KREMEN1Q96MU8 473 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 TCFL5Q9UL49 500 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 PCDHB5Q9Y5E4 795 aa3.18□□□□□ -1.9
RNU6-561P-201ENST00000516222 A0A1W2PQJ5 194 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 UPK3BL1B0FP48 263 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 UPK3BL2E5RIL1 263 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 LIG3P49916 1009 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 CDR1P51861 262 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 CYP4F8P98187 520 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 NR1I3Q14994 352 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 RTP5Q14D33 572 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 TMEM201Q5SNT2 666 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 CCDC84Q86UT8 332 aaPredicted RBP3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 LINC00116Q8NCU8 138 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 EAF1Q96JC9 268 aaPredicted RBP3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 EBF1Q9UH73 591 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 ZNF281Q9Y2X9 895 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 ADAMTS20P59510 1910 aa3.17□□□□□ -1.9
RNU6-561P-201ENST00000516222 GRIN3BO60391 1043 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 SDHBP21912 280 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 MAGEA10P43363 369 aaPredicted RBP3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 SLURP1P55000 103 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 ZXDAP98168 799 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 MAP3K11Q16584 847 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 TMEFF1Q8IYR6 380 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 USHBP1Q8N6Y0 703 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 CRELD1Q96HD1 420 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 G6PC3Q9BUM1 346 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 FOXP3Q9BZS1 431 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 EPB41L4AQ9HCS5 686 aaPredicted RBP3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 FAN1Q9Y2M0 1017 aa3.16□□□□□ -1.9
RNU6-561P-201ENST00000516222 A0A1W2PQ45 241 aaPredicted RBP3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 A0A1W2PQY0 241 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 SHISA3A0PJX4 238 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 NOTOA8MTQ0 251 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 NUDT19A8MXV4 375 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 AKAP8O43823 692 aaKnown RBP3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 FKTNO75072 461 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 LDHBP07195 334 aaKnown RBP3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 SYPP08247 313 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 PRKCAP17252 672 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 GNA15P30679 374 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 KRTAP10-2P60368 255 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 FMR1Q06787 632 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 RAD51AP2Q09MP3 1159 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 ZC3H14Q6PJT7 736 aaKnown RBP3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 IGDCC3Q8IVU1 814 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 TCTN2Q96GX1 697 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 HHIPL1Q96JK4 782 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 FCRL2Q96LA5 508 aaPredicted RBP3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 SMPD4Q9NXE4 827 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 KLHL14Q9P2G3 628 aa3.15□□□□□ -1.91
RNU6-561P-201ENST00000516222 KLHL3Q9UH77 587 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms