RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 RAB30Q15771 203 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 CSPP1Q1MSJ5 1256 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 TMEM240Q5SV17 173 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 RASIP1Q5U651 963 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 EVI5LQ96CN4 794 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 OSBPL5Q9H0X9 879 aaPredicted RBP11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 CFAP54Q96N23 3096 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 MYH2Q9UKX2 1941 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 CHD7Q9P2D1 2997 aa11.25□□□□□ -0.61
CSNK1A1-206ENST00000515748 MAGEB6P1A0A0J9YX57 407 aa11.24□□□□□ -0.61
CSNK1A1-206ENST00000515748 CYP2C19P33261 490 aa11.24□□□□□ -0.61
CSNK1A1-206ENST00000515748 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
CSNK1A1-206ENST00000515748 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
CSNK1A1-206ENST00000515748 MIGA1Q8NAN2 632 aa11.24□□□□□ -0.61
CSNK1A1-206ENST00000515748 APPBP2Q92624 585 aa11.24□□□□□ -0.61
CSNK1A1-206ENST00000515748 DHX36Q9H2U1 1008 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-206ENST00000515748 RLFQ13129 1914 aa11.24□□□□□ -0.61
CSNK1A1-206ENST00000515748 CACNA1GO43497 2377 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 TBC1D12O60347 775 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 HOXA7P31268 230 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 HERVK_113P62684 666 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 ERVK-9P63128 1117 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 ERVK-24P63145 666 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 DYNLL1P63167 89 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 SH3D19Q5HYK7 790 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 METTL16Q86W50 562 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 SLC44A5Q8NCS7 719 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 HLA-CQ95604 372 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 FSD1Q9BTV5 496 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 CRNKL1Q9BZJ0 848 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 PLXNA1Q9UIW2 1896 aa11.23□□□□□ -0.61
CSNK1A1-206ENST00000515748 USP34Q70CQ2 3546 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 DDTLA6NHG4 134 aaPredicted RBP11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 PQBP1O60828 265 aaKnown RBP11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 MBD4O95243 580 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 TIMP1P01033 207 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 ALADP13716 330 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 POU3F3P20264 500 aaPredicted RBP11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 FAAP100Q0VG06 881 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 PICALMQ13492 652 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 LRRC41Q15345 812 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 ZMYM1Q5SVZ6 1142 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 CCDC174Q6PII3 467 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 LCORLQ8N3X6 602 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 CCDC136Q96JN2 1154 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 EHD4Q9H223 541 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 CWC22Q9HCG8 908 aaKnown RBP11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 HERC5Q9UII4 1024 aaKnown RBP11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 YBX2Q9Y2T7 364 aaKnown RBP11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 MTCH2Q9Y6C9 303 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 SPTBN4Q9H254 2564 aa11.22□□□□□ -0.61
CSNK1A1-206ENST00000515748 PTPRFP10586 1907 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 IGHA2P01877 340 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 CHGBP05060 677 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 CYBAP13498 195 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 TTC22Q5TAA0 569 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 MFSD5Q6N075 450 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 GIMAP6Q6P9H5 292 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 ZNF365Q70YC5 407 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 NPLOC4Q8TAT6 608 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 OSBP2Q969R2 916 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 ATP8A2Q9NTI2 1148 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 PPP4R2Q9NY27 417 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 PI4KBQ9UBF8 816 aa11.21□□□□□ -0.61
CSNK1A1-206ENST00000515748 PRRC2BQ5JSZ5 2229 aaKnown RBP11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 SLC15A5A6NIM6 579 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 HOXC6P09630 235 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 GSPT1P15170 499 aaKnown RBP11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 GNAT2P19087 354 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 PTPREP23469 700 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 PPIGQ13427 754 aaKnown RBP eCLIP11.2□□□□□ -0.625e-10■■□□□ 13.7
CSNK1A1-206ENST00000515748 SLFNL1Q499Z3 407 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 GJD3Q8N144 294 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 PAGR1Q9BTK6 254 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 ARMT1Q9H993 441 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 DCP1AQ9NPI6 582 aaPredicted RBP11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 PHF24Q9UPV7 400 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 MYO5AQ9Y4I1 1855 aaKnown RBP11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 FOCADQ5VW36 1801 aa11.2□□□□□ -0.62
CSNK1A1-206ENST00000515748 PHIPQ8WWQ0 1821 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 ZFHX2Q9C0A1 2572 aaPredicted RBP11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 USP17L5A8MUK1 530 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 DCDC2CA8MYV0 355 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 M0R2C6 588 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 RFXAPO00287 272 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 HIP1O00291 1037 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 SEPT4O43236 478 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 GPAA1O43292 621 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 HLA-DOAP06340 250 aa11.19□□□□□ -0.62
CSNK1A1-206ENST00000515748 ACRP10323 421 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms