RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 RAB3GAP1Q15042 981 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 RAB30Q15771 203 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 KCNA10Q16322 511 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 SPRED2Q7Z698 418 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 RNF180Q86T96 592 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 FAM126BQ8IXS8 530 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 ANKS1AQ92625 1134 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 SLC28A3Q9HAS3 691 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 MCM3APO60318 1980 aa12.98□□□□□ -0.33
NEDD9-215ENST00000514660 RBAK-RBAKDNI3L0D1 243 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 SHMT1P34896 483 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 COG2Q14746 738 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
NEDD9-215ENST00000514660 SEPT2Q15019 361 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 ZNF792Q3KQV3 632 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 NCAPG2Q86XI2 1143 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 ABRAQ8N0Z2 381 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 ATG4CQ96DT6 458 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 TINF2Q9BSI4 451 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 TSEN34Q9BSV6 310 aaKnown RBP12.97□□□□□ -0.33
NEDD9-215ENST00000514660 CERS4Q9HA82 394 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 IL23AQ9NPF7 189 aa12.97□□□□□ -0.33
NEDD9-215ENST00000514660 PTPRCP08575 1304 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 ZNF521Q96K83 1311 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 SMIM22K7EJ46 135 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 CTAGE5O15320 804 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
NEDD9-215ENST00000514660 CD4P01730 458 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 ATXN8OSP0DMR3 200 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 POU3F3P20264 500 aaPredicted RBP12.96□□□□□ -0.33
NEDD9-215ENST00000514660 DSG3P32926 999 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 USP14P54578 494 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 NHLH1Q02575 133 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.33
NEDD9-215ENST00000514660 NAA16Q6N069 864 aaPredicted RBP12.96□□□□□ -0.33
NEDD9-215ENST00000514660 PSRC1Q6PGN9 363 aaPredicted RBP12.96□□□□□ -0.33
NEDD9-215ENST00000514660 OTOP2Q7RTS6 562 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 SIAH1Q8IUQ4 282 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 NEUROD6Q96NK8 337 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 LRP2BPQ9P2M1 347 aa12.96□□□□□ -0.33
NEDD9-215ENST00000514660 PLCD1P51178 756 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 PLS1Q14651 629 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 TMEM132BQ14DG7 1078 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 AAK1Q2M2I8 961 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 ABCB5Q2M3G0 1257 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 TRIM34Q9BYJ4 488 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 WNT8AQ9H1J5 351 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
NEDD9-215ENST00000514660 MROH8Q9H579 483 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 PIH1D3Q9NQM4 214 aaKnown RBP12.95□□□□□ -0.34
NEDD9-215ENST00000514660 NRBP1Q9UHY1 535 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 SCN5AQ14524 2016 aa12.95□□□□□ -0.34
NEDD9-215ENST00000514660 FGBP02675 491 aa12.94□□□□□ -0.34
NEDD9-215ENST00000514660 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
NEDD9-215ENST00000514660 UBTFL1P0CB47 393 aaPredicted RBP12.94□□□□□ -0.34
NEDD9-215ENST00000514660 AKR1A1P14550 325 aa12.94□□□□□ -0.34
NEDD9-215ENST00000514660 CERKLQ49MI3 558 aaPredicted RBP12.94□□□□□ -0.34
NEDD9-215ENST00000514660 TMEM199Q8N511 208 aa12.94□□□□□ -0.34
NEDD9-215ENST00000514660 PHOX2BQ99453 314 aa12.94□□□□□ -0.34
NEDD9-215ENST00000514660 MEIS3Q99687 375 aa12.94□□□□□ -0.34
NEDD9-215ENST00000514660 ZNF318Q5VUA4 2279 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 GRIN2DO15399 1336 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
NEDD9-215ENST00000514660 ARVCFO00192 962 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 LPXNO60711 386 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 BAG3O95817 575 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 HLA-DOAP06340 250 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 ASGR1P07306 291 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 FCER1AP12319 257 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 PTGS1P23219 599 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 FBXL18Q96ME1 805 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 TANGO6Q9C0B7 1094 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 HOXC10Q9NYD6 342 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 SERPINB13Q9UIV8 391 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 PTPRSQ13332 1948 aa12.93□□□□□ -0.34
NEDD9-215ENST00000514660 ELP1O95163 1332 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 MOXD2PA6NHM9 499 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 APBB1O00213 710 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 CA3P07451 260 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 PLCG2P16885 1265 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 CST5P28325 142 aaPredicted RBP12.92□□□□□ -0.34
NEDD9-215ENST00000514660 CCL23P55773 120 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 GABPAQ06546 454 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 MIGA1Q8NAN2 632 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 FGD4Q96M96 766 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 MMP19Q99542 508 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 EHD4Q9H223 541 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 FBXO28Q9NVF7 368 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 SLC5A4Q9NY91 659 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 ADAMTS5Q9UNA0 930 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 AKAP2Q9Y2D5 859 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 PCDHA11Q9Y5I1 949 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 WDFY4Q6ZS81 3184 aa12.92□□□□□ -0.34
NEDD9-215ENST00000514660 TTLL4Q14679 1199 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms