RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 GPT2Q8TD30 523 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.44□□□□□ -1.7
AFP-205ENST00000513720 SCG3Q8WXD2 468 aaKnown RBP4.44□□□□□ -1.7
AFP-205ENST00000513720 SGCDQ92629 289 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 GTF3C6Q969F1 213 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 PPP2R3CQ969Q6 453 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 CLIP3Q96DZ5 547 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 CNDP2Q96KP4 475 aaKnown RBP4.44□□□□□ -1.7
AFP-205ENST00000513720 CEP295NLQ96MC4 621 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 CCT7Q99832 543 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 TUBA1CQ9BQE3 449 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 TRIM5Q9C035 493 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 SEMA4AQ9H3S1 761 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 BICC1Q9H694 974 aaKnown RBP4.44□□□□□ -1.7
AFP-205ENST00000513720 VPS37BQ9H9H4 285 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 NGRNQ9NPE2 291 aaKnown RBP4.44□□□□□ -1.7
AFP-205ENST00000513720 ENAMQ9NRM1 1142 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 FKBP14Q9NWM8 211 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 EMC3Q9P0I2 261 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 STAP2Q9UGK3 403 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 DDX25Q9UHL0 483 aaKnown RBP4.44□□□□□ -1.7
AFP-205ENST00000513720 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 MAPK8IP1Q9UQF2 711 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 ZNF148Q9UQR1 794 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 ATP6V1DQ9Y5K8 247 aa4.44□□□□□ -1.7
AFP-205ENST00000513720 NCAPD3P42695 1498 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 IQANK1A0A1B0GTG1 560 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 TMEM221A6NGB7 291 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 LRRC10BA6NIK2 292 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 SOWAHDA6NJG2 315 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 LRRC72A6NJI9 287 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 RASSF10A6NK89 507 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 EIF3CLB5ME19 914 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 K7ELQ4 463 aaPredicted RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 CHUKO15111 745 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CETN3O15182 167 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 TEX28O15482 410 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 XPOTO43592 962 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 USO1O60763 962 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 BAG2O95816 211 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 FESP07332 822 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 PARP1P09874 1014 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 C7P10643 843 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 BCRP11274 1271 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 GZMAP12544 262 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 EPB42P16452 691 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 LMOD1P29536 600 aaPredicted RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 PRKAR1BP31321 381 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 SLC16A2P36021 539 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CAP2P40123 477 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 MTHFRP42898 656 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 STT3AP46977 705 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 MASP1P48740 699 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 SLC4A3P48751 1232 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 POLD2P49005 469 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 SARSP49591 514 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 MCM2P49736 904 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CORO7P57737 925 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 GABREP78334 506 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CETN1Q12798 172 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 NFIAQ12857 509 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 DPYSQ14117 519 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 BBS9Q3SYG4 887 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 USH1GQ495M9 461 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CAVIN4Q5BKX8 364 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CREB3L3Q68CJ9 461 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 RCSD1Q6JBY9 416 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CAVIN1Q6NZI2 390 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 ERAP2Q6P179 960 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 NEK5Q6P3R8 708 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 ABRAXAS1Q6UWZ7 409 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 BICDL1Q6ZP65 573 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CCDC121Q6ZUS5 278 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 B4GALNT4Q76KP1 1039 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CENPQQ7L2Z9 268 aaPredicted RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 PPFIBP1Q86W92 1011 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 APLFQ8IW19 511 aaPredicted RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 CCDC83Q8IWF9 413 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 TRIM22Q8IYM9 498 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 ZBTB8BQ8NAP8 495 aaPredicted RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 OR8H1Q8NGG4 311 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 PPP1R14CQ8TAE6 165 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CCHCR1Q8TD31 782 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 JPH3Q8WXH2 748 aaPredicted RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 RABGGTAQ92696 567 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 CUL5Q93034 780 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 SLC35B4Q969S0 331 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 RBM41Q96IZ5 413 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 SPATA17Q96L03 361 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 COG8Q96MW5 612 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 PSKH2Q96QS6 385 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 NR1H4Q96RI1 486 aaPredicted RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 NELL2Q99435 816 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 EIF3CQ99613 913 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 TSG101Q99816 390 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 TTPALQ9BTX7 342 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 SPZ1Q9BXG8 430 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 NIFKQ9BYG3 293 aaKnown RBP4.43□□□□□ -1.7
AFP-205ENST00000513720 ZNF700Q9H0M5 742 aa4.43□□□□□ -1.7
AFP-205ENST00000513720 ACBD3Q9H3P7 528 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms