RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 PTPRFP10586 1907 aa8.7□□□□□ -1.02
HTT-212ENST00000513639 F5H6K3 240 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 ZBED4O75132 1171 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 RASA1P20936 1047 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 ADORA2AP29274 412 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 CNGA1P29973 690 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 KLRC3Q07444 240 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 CCL14Q16627 93 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 KIAA1755Q5JYT7 1200 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 OLFML2BQ68BL8 750 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 LHX8Q68G74 356 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 NCAPG2Q86XI2 1143 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 ARRDC4Q8NCT1 418 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 SPOCK2Q92563 424 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 CRBNQ96SW2 442 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 NAPBQ9H115 298 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 C11orf49Q9H6J7 331 aa8.69□□□□□ -1.02
HTT-212ENST00000513639 CTDP1Q9Y5B0 961 aaPredicted RBP8.69□□□□□ -1.02
HTT-212ENST00000513639 LOC285556D6RIA3 1793 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 RBBP6Q7Z6E9 1792 aaKnown RBP8.68□□□□□ -1.02
HTT-212ENST00000513639 FOCADQ5VW36 1801 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 M0R2C6 588 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 VWA5AO00534 786 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 TTLL1O95922 423 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 TSPY3P0CV98 308 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 TSPY8P0CW00 308 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 FDX1P10109 184 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 PDE1AP54750 535 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 KCTD2Q14681 263 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 TMEM132BQ14DG7 1078 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 STK11IPQ8N1F8 1099 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 NEDD1Q8NHV4 660 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 ATG4CQ96DT6 458 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 YTHDC1Q96MU7 727 aaKnown RBP8.68□□□□□ -1.02
HTT-212ENST00000513639 SLF1Q9BQI6 1058 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.68□□□□□ -1.02
HTT-212ENST00000513639 HELLSQ9NRZ9 838 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 MTMR4Q9NYA4 1195 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 NRBP1Q9UHY1 535 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 FEM1BQ9UK73 627 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 PPP1R9AQ9ULJ8 1098 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 DIS3Q9Y2L1 958 aaKnown RBP8.68□□□□□ -1.02
HTT-212ENST00000513639 SIPA1L1O43166 1804 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 MGAMO43451 1857 aa8.68□□□□□ -1.02
HTT-212ENST00000513639 A0A1W2PPC1 479 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 ZSWIM8A7E2V4 1837 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 SMIM22K7EJ46 135 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 PRDM1O75626 825 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 CCND3P30281 292 aaPredicted RBP8.67□□□□□ -1.02
HTT-212ENST00000513639 CYP2C19P33261 490 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
HTT-212ENST00000513639 TFAP4Q01664 338 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 PPARAQ07869 468 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 ALX1Q15699 326 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 MCMDC2Q4G0Z9 681 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 FAM83BQ5T0W9 1011 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 RIOX2Q8IUF8 465 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 GMCL1P1Q8NEA9 526 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 NPLOC4Q8TAT6 608 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 OTUD7AQ8TE49 926 aaPredicted RBP8.67□□□□□ -1.02
HTT-212ENST00000513639 CHURC1Q8WUH1 139 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 ATAD5Q96QE3 1844 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 SEC62Q99442 399 aaKnown RBP8.67□□□□□ -1.02
HTT-212ENST00000513639 MMP19Q99542 508 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 FLRT1Q9NZU1 646 aa8.67□□□□□ -1.02
HTT-212ENST00000513639 DDX20Q9UHI6 824 aaKnown RBP8.67□□□□□ -1.02
HTT-212ENST00000513639 CDK5RAP2Q96SN8 1893 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 DNAH12Q6ZR08 3092 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 ROBO3Q96MS0 1386 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 IGKV6D-41A0A0C4DH26 115 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 ATP2A1O14983 1001 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 SEPT4O43236 478 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 COBLO75128 1261 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 NDUFB10O96000 172 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 IGHA2P01877 340 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 COL6A1P12109 1028 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 MNX1P50219 401 aaPredicted RBP8.66□□□□□ -1.02
HTT-212ENST00000513639 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 MSL3Q8N5Y2 521 aaKnown RBP8.66□□□□□ -1.02
HTT-212ENST00000513639 DIS3LQ8TF46 1054 aaKnown RBP8.66□□□□□ -1.02
HTT-212ENST00000513639 DDX11Q96FC9 970 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 CEP95Q96GE4 821 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 TEX13BQ9BXU2 312 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 EPB41L4AQ9HCS5 686 aaPredicted RBP8.66□□□□□ -1.02
HTT-212ENST00000513639 FBXO28Q9NVF7 368 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 RBM27Q9P2N5 1060 aaKnown RBP8.66□□□□□ -1.02
HTT-212ENST00000513639 FBXO40Q9UH90 709 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 ANAPC4Q9UJX5 808 aa8.66□□□□□ -1.02
HTT-212ENST00000513639 SALL3Q9BXA9 1300 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 TSPY2A6NKD2 308 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 DNM1LO00429 736 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 BMP3P12645 472 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 BMP8BP34820 402 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 FXR1P51114 621 aaKnown RBP eCLIP8.65□□□□□ -1.02
HTT-212ENST00000513639 OAZ1P54368 228 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 FAM47AQ5JRC9 791 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 SLFN13Q68D06 897 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms