RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RSPH14Q9UHP6 348 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 DIP2CQ9Y2E4 1556 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 TSPOAP1O95153 1857 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 ANKARQ7Z5J8 1434 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 DNAJC21Q5F1R6 531 aaKnown RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 SH2D4BQ5SQS7 431 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 CCDC122Q5T0U0 273 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 FAM102BQ5T8I3 360 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 HHATQ5VTY9 493 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 GBP6Q6ZN66 633 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 BRAPQ7Z569 592 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 PLEKHM2Q8IWE5 1019 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 MIPOL1Q8TD10 442 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 HAUS8Q9BT25 410 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 SLITRK6Q9H5Y7 841 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 LZTFL1Q9NQ48 299 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 TTF2Q9UNY4 1162 aaKnown RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 UTP11Q9Y3A2 253 aaKnown RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 TCP10L2B9ZVM9 353 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 HEXIM1O94992 359 aaKnown RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 ZSCAN20P17040 1043 aaPredicted RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 LIG4P49917 911 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 GTF2IP78347 998 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 KARSQ15046 597 aaKnown RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 Q3C1V9 767 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 MAPKAPK5Q8IW41 473 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 TPH2Q8IWU9 490 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 CCDC170Q8IYT3 715 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 ARMT1Q9H993 441 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 VWDEQ8N2E2 1590 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 TLR3O15455 904 aaKnown RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 ARPP19P56211 112 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 NONOQ15233 471 aaKnown RBP eCLIP6.38□□□□□ -1.39
USP38-203ENST00000511739 CCDC62Q6P9F0 684 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 N4BP2L2Q92802 583 aaPredicted RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 UIMC1Q96RL1 719 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 ESYT1Q9BSJ8 1104 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 LRWD1Q9UFC0 647 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 ANGPTL3Q9Y5C1 460 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 USP6P35125 1406 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 FBXW4P57775 412 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 ACBD5Q5T8D3 534 aaPredicted RBP6.38□□□□□ -1.39
USP38-203ENST00000511739 KRT25Q7Z3Z0 450 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 CNGA4Q8IV77 575 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 MIS12Q9H081 205 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.38□□□□□ -1.39
USP38-203ENST00000511739 RNMTO43148 476 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 LTKP29376 864 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 PRIM1P49642 420 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 DHX32Q7L7V1 743 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 CEP57Q86XR8 500 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 CACNA2D3Q8IZS8 1091 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 RNF217Q8TC41 542 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 RSAD2Q8WXG1 361 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 CNKSR1Q969H4 720 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 HAUS1Q96CS2 278 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 HVCN1Q96D96 273 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 DDX21Q9NR30 783 aaKnown RBP eCLIP6.37□□□□□ -1.39
USP38-203ENST00000511739 NRBP2Q9NSY0 501 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 DACT1Q9NYF0 836 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 CPSF3Q9UKF6 684 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 CCPG1Q9ULG6 757 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 CTNND2Q9UQB3 1225 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 CNPY2Q9Y2B0 182 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 B4E1Z4 1266 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 DEXIO95424 95 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 ZNF131P52739 623 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TUBB4BP68371 445 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 CWF19L2Q2TBE0 894 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 FAM160B1Q5W0V3 765 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 CTAGE3PQ8IX95 158 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 NME8Q8N427 588 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TTC30BQ8N4P2 665 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TGFBRAP1Q8WUH2 860 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TMX3Q96JJ7 454 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 UBN1Q9NPG3 1134 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 MOSPD1Q9UJG1 213 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TNNQ9UQP3 1299 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TMEM191BP0C7N4 346 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 CALCRLQ16602 461 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 MCUR1Q96AQ8 359 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 LZTS2Q9BRK4 669 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 DNAJC25Q9H1X3 360 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TBC1D7Q9P0N9 293 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 MYO1AQ9UBC5 1043 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 SLC12A6Q9UHW9 1150 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 BZW2Q9Y6E2 419 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 V9GY48 417 aaPredicted RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 SYNJ2BP-COX16A0A087WUM0 186 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 MAP3K7O43318 606 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 PRDM1O75626 825 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 HADHQ16836 314 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 MCF2L2Q86YR7 1114 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 SCYL1Q96KG9 808 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 TTC1Q99614 292 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 COX16Q9P0S2 106 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 POLIQ9UNA4 740 aa6.37□□□□□ -1.39
USP38-203ENST00000511739 MRPL11Q9Y3B7 192 aaKnown RBP6.37□□□□□ -1.39
USP38-203ENST00000511739 H0YCG3 227 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms