RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 MTMR10Q9NXD2 777 aa17.83■□□□□ 0.44
SMAD5-206ENST00000509962 ATP11BQ9Y2G3 1177 aa17.83■□□□□ 0.44
SMAD5-206ENST00000509962 RLFQ13129 1914 aa17.82■□□□□ 0.44
SMAD5-206ENST00000509962 SMIM22K7EJ46 135 aa17.82■□□□□ 0.44
SMAD5-206ENST00000509962 CHGBP05060 677 aa17.82■□□□□ 0.44
SMAD5-206ENST00000509962 MAML3Q96JK9 1138 aa17.82■□□□□ 0.44
SMAD5-206ENST00000509962 PUS7LQ9H0K6 701 aaKnown RBP17.82■□□□□ 0.44
SMAD5-206ENST00000509962 RCAN3Q9UKA8 241 aa17.82■□□□□ 0.44
SMAD5-206ENST00000509962 ADAMTS5Q9UNA0 930 aa17.82■□□□□ 0.44
SMAD5-206ENST00000509962 ZNFX1Q9P2E3 1918 aaKnown RBP17.82■□□□□ 0.44
SMAD5-206ENST00000509962 STAT3P40763 770 aa17.81■□□□□ 0.44
SMAD5-206ENST00000509962 KCTD2Q14681 263 aa17.81■□□□□ 0.44
SMAD5-206ENST00000509962 MMP19Q99542 508 aa17.81■□□□□ 0.44
SMAD5-206ENST00000509962 STXBP5LQ9Y2K9 1186 aa17.81■□□□□ 0.44
SMAD5-206ENST00000509962 ZNF236Q9UL36 1845 aa17.8■□□□□ 0.44
SMAD5-206ENST00000509962 SMARCA5O60264 1052 aaPredicted RBP17.8■□□□□ 0.44
SMAD5-206ENST00000509962 ADCYAP1R1P41586 468 aa17.8■□□□□ 0.44
SMAD5-206ENST00000509962 RIOX2Q8IUF8 465 aa17.8■□□□□ 0.44
SMAD5-206ENST00000509962 FBXO28Q9NVF7 368 aa17.8■□□□□ 0.44
SMAD5-206ENST00000509962 ARPP21Q9UBL0 812 aaPredicted RBP17.8■□□□□ 0.44
SMAD5-206ENST00000509962 VWA5AO00534 786 aa17.79■□□□□ 0.44
SMAD5-206ENST00000509962 LRRC41Q15345 812 aa17.79■□□□□ 0.44
SMAD5-206ENST00000509962 FERMT2Q96AC1 680 aa17.79■□□□□ 0.44
SMAD5-206ENST00000509962 STRBPQ96SI9 672 aaKnown RBP17.79■□□□□ 0.44
SMAD5-206ENST00000509962 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
SMAD5-206ENST00000509962 PRDM5Q9NQX1 630 aaPredicted RBP17.79■□□□□ 0.44
SMAD5-206ENST00000509962 ECHDC1Q9NTX5 307 aa17.79■□□□□ 0.44
SMAD5-206ENST00000509962 NRBP1Q9UHY1 535 aa17.79■□□□□ 0.44
SMAD5-206ENST00000509962 DIS3Q9Y2L1 958 aaKnown RBP17.79■□□□□ 0.44
SMAD5-206ENST00000509962 A0A0G2JMZ2 1700 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 MINDY4BA8MYZ0 360 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 PGK2P07205 417 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 RARBP10826 455 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 COPB2P35606 906 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 SBK1Q52WX2 424 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 FAM83BQ5T0W9 1011 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 STK11IPQ8N1F8 1099 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 TINF2Q9BSI4 451 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 MYH7P12883 1935 aa17.78■□□□□ 0.44
SMAD5-206ENST00000509962 POTEB2H3BUK9 544 aa17.77■□□□□ 0.44
SMAD5-206ENST00000509962 FAM47AQ5JRC9 791 aa17.77■□□□□ 0.44
SMAD5-206ENST00000509962 FAM109BQ6ICB4 259 aaPredicted RBP17.77■□□□□ 0.44
SMAD5-206ENST00000509962 GPATCH3Q96I76 525 aa17.77■□□□□ 0.44
SMAD5-206ENST00000509962 XPNPEP3Q9NQH7 507 aa17.77■□□□□ 0.44
SMAD5-206ENST00000509962 SMCHD1A6NHR9 2005 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 GSG1L2A8MUP6 293 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 ZNF792Q3KQV3 632 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 TRIM60Q495X7 471 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 GIMAP6Q6P9H5 292 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 RNF180Q86T96 592 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 BADQ92934 168 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 SLF1Q9BQI6 1058 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 NYAP2Q9P242 653 aa17.76■□□□□ 0.43
SMAD5-206ENST00000509962 ZNF214Q9UL59 606 aaPredicted RBP17.76■□□□□ 0.43
SMAD5-206ENST00000509962 COL11A1P12107 1806 aaPredicted RBP17.76■□□□□ 0.43
SMAD5-206ENST00000509962 PARP14Q460N5 1801 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 LAMA3Q16787 3333 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 F5H6K3 240 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 APPP05067 770 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 KLRC3Q07444 240 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 SNX17Q15036 470 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 C20orf194Q5TEA3 1177 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 C1orf53Q5VUE5 145 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 ZNF444Q8N0Y2 327 aaPredicted RBP17.75■□□□□ 0.43
SMAD5-206ENST00000509962 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 PRPF38AQ8NAV1 312 aaKnown RBP17.75■□□□□ 0.43
SMAD5-206ENST00000509962 DDX11Q96FC9 970 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.75■□□□□ 0.43
SMAD5-206ENST00000509962 ZNF287Q9HBT7 754 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 CNPY2Q9Y2B0 182 aa17.75■□□□□ 0.43
SMAD5-206ENST00000509962 CTDP1Q9Y5B0 961 aaPredicted RBP17.75■□□□□ 0.43
SMAD5-206ENST00000509962 RNF113AO15541 343 aaKnown RBP17.74■□□□□ 0.43
SMAD5-206ENST00000509962 PGK1P00558 417 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 RASA1P20936 1047 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 TLE2Q04725 743 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 SHHQ15465 462 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 REPS2Q8NFH8 660 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 APPBP2Q92624 585 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 FAM161BQ96MY7 647 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 NUP88Q99567 741 aaPredicted RBP17.74■□□□□ 0.43
SMAD5-206ENST00000509962 TEX13BQ9BXU2 312 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 DCTPP1Q9H773 170 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 CLIP2Q9UDT6 1046 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 PHF24Q9UPV7 400 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
SMAD5-206ENST00000509962 DNAH12Q6ZR08 3092 aa17.73■□□□□ 0.43
SMAD5-206ENST00000509962 ZBED4O75132 1171 aa17.73■□□□□ 0.43
SMAD5-206ENST00000509962 ZFYP08048 801 aaPredicted RBP17.73■□□□□ 0.43
SMAD5-206ENST00000509962 ZNF865P0CJ78 1059 aaPredicted RBP17.73■□□□□ 0.43
SMAD5-206ENST00000509962 AKR1A1P14550 325 aa17.73■□□□□ 0.43
SMAD5-206ENST00000509962 TAL1P17542 331 aaPredicted RBP17.73■□□□□ 0.43
SMAD5-206ENST00000509962 GNAT2P19087 354 aa17.73■□□□□ 0.43
SMAD5-206ENST00000509962 LRRFIP1Q32MZ4 808 aaKnown RBP17.73■□□□□ 0.43
SMAD5-206ENST00000509962 ZNF697Q5TEC3 545 aa17.73■□□□□ 0.43
SMAD5-206ENST00000509962 SNRNP48Q6IEG0 339 aaKnown RBP17.73■□□□□ 0.43
SMAD5-206ENST00000509962 OSBP2Q969R2 916 aa17.73■□□□□ 0.43
SMAD5-206ENST00000509962 PDLIM7Q9NR12 457 aa17.73■□□□□ 0.43
SMAD5-206ENST00000509962 PLXNA1Q9UIW2 1896 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms