RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 ATG4CQ96DT6 458 aa17.45■□□□□ 0.38
HMGCL-208ENST00000509389 DDX20Q9UHI6 824 aaKnown RBP17.45■□□□□ 0.38
HMGCL-208ENST00000509389 ZNFX1Q9P2E3 1918 aaKnown RBP17.44■□□□□ 0.38
HMGCL-208ENST00000509389 WDR46O15213 610 aaKnown RBP17.44■□□□□ 0.38
HMGCL-208ENST00000509389 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
HMGCL-208ENST00000509389 GSPT1P15170 499 aaKnown RBP17.44■□□□□ 0.38
HMGCL-208ENST00000509389 PLS1Q14651 629 aa17.44■□□□□ 0.38
HMGCL-208ENST00000509389 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
HMGCL-208ENST00000509389 TTC22Q5TAA0 569 aa17.44■□□□□ 0.38
HMGCL-208ENST00000509389 STRBPQ96SI9 672 aaKnown RBP17.44■□□□□ 0.38
HMGCL-208ENST00000509389 BACH2Q9BYV9 841 aa17.44■□□□□ 0.38
HMGCL-208ENST00000509389 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
HMGCL-208ENST00000509389 COL11A1P12107 1806 aaPredicted RBP17.44■□□□□ 0.38
HMGCL-208ENST00000509389 MSCO60682 206 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 COBLO75128 1261 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 CYBAP13498 195 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 MX1P20591 662 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 MAGEA10P43363 369 aaPredicted RBP17.43■□□□□ 0.38
HMGCL-208ENST00000509389 OLFML2BQ68BL8 750 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 SAMD1Q6SPF0 538 aaPredicted RBP17.43■□□□□ 0.38
HMGCL-208ENST00000509389 NCAPG2Q86XI2 1143 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 LRCH3Q96II8 777 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 MROH8Q9H579 483 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 KANSL2Q9H9L4 492 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 ARPP21Q9UBL0 812 aaPredicted RBP17.43■□□□□ 0.38
HMGCL-208ENST00000509389 TTC41PQ6P2S7 1318 aa17.43■□□□□ 0.38
HMGCL-208ENST00000509389 GREB1LQ9C091 1923 aaPredicted RBP17.42■□□□□ 0.38
HMGCL-208ENST00000509389 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
HMGCL-208ENST00000509389 GSG1L2A8MUP6 293 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 TMEM132BQ14DG7 1078 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 SBK1Q52WX2 424 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 TSHZ3Q63HK5 1081 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 ABRAQ8N0Z2 381 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 PI4K2BQ8TCG2 481 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 OSBP2Q969R2 916 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.41■□□□□ 0.38
HMGCL-208ENST00000509389 SENP6Q9GZR1 1112 aaPredicted RBP17.41■□□□□ 0.38
HMGCL-208ENST00000509389 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 ADAMTS5Q9UNA0 930 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 LAMA3Q16787 3333 aa17.41■□□□□ 0.38
HMGCL-208ENST00000509389 RNF113AO15541 343 aaKnown RBP17.4■□□□□ 0.38
HMGCL-208ENST00000509389 APPBP2Q92624 585 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 GPATCH3Q96I76 525 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 GOPCQ9HD26 462 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 SLC5A4Q9NY91 659 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 DNM1LO00429 736 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 RAD21O60216 631 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 SLC25A27O95847 323 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 FCER1AP12319 257 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 RASA1P20936 1047 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 GIMAP6Q6P9H5 292 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 STK11IPQ8N1F8 1099 aa17.4■□□□□ 0.38
HMGCL-208ENST00000509389 MINDY4BA8MYZ0 360 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
HMGCL-208ENST00000509389 PRAMEF19Q5SWL8 479 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 FAM83BQ5T0W9 1011 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 GJC2Q5T442 439 aaPredicted RBP17.39■□□□□ 0.37
HMGCL-208ENST00000509389 ANO1Q5XXA6 986 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 RIOX2Q8IUF8 465 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 MAML3Q96JK9 1138 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 UBE2OQ9C0C9 1292 aaKnown RBP17.39■□□□□ 0.37
HMGCL-208ENST00000509389 MKNK2Q9HBH9 465 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 PPP1R9AQ9ULJ8 1098 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 ROBO3Q96MS0 1386 aa17.39■□□□□ 0.37
HMGCL-208ENST00000509389 VWA5AO00534 786 aa17.38■□□□□ 0.37
HMGCL-208ENST00000509389 SEPT4O43236 478 aa17.38■□□□□ 0.37
HMGCL-208ENST00000509389 GPAA1O43292 621 aa17.38■□□□□ 0.37
HMGCL-208ENST00000509389 ATN1P54259 1190 aaPredicted RBP17.38■□□□□ 0.37
HMGCL-208ENST00000509389 TDHQ8IZJ6 230 aa17.38■□□□□ 0.37
HMGCL-208ENST00000509389 ARRDC4Q8NCT1 418 aa17.38■□□□□ 0.37
HMGCL-208ENST00000509389 MMP19Q99542 508 aa17.38■□□□□ 0.37
HMGCL-208ENST00000509389 EPB41L4AQ9HCS5 686 aaPredicted RBP17.38■□□□□ 0.37
HMGCL-208ENST00000509389 SMCHD1A6NHR9 2005 aa17.38■□□□□ 0.37
HMGCL-208ENST00000509389 PLXNA1Q9UIW2 1896 aa17.37■□□□□ 0.37
HMGCL-208ENST00000509389 M0R2C6 588 aa17.37■□□□□ 0.37
HMGCL-208ENST00000509389 STAT3P40763 770 aa17.37■□□□□ 0.37
HMGCL-208ENST00000509389 MDM2Q00987 491 aaPredicted RBP17.37■□□□□ 0.37
HMGCL-208ENST00000509389 LRIT3Q3SXY7 679 aa17.37■□□□□ 0.37
HMGCL-208ENST00000509389 REPS2Q8NFH8 660 aa17.37■□□□□ 0.37
HMGCL-208ENST00000509389 NUP88Q99567 741 aaPredicted RBP17.37■□□□□ 0.37
HMGCL-208ENST00000509389 NYAP2Q9P242 653 aa17.37■□□□□ 0.37
HMGCL-208ENST00000509389 ZNF214Q9UL59 606 aaPredicted RBP17.37■□□□□ 0.37
HMGCL-208ENST00000509389 MYH4Q9Y623 1939 aa17.36■□□□□ 0.37
HMGCL-208ENST00000509389 PGK2P07205 417 aa17.36■□□□□ 0.37
HMGCL-208ENST00000509389 GNAT2P19087 354 aa17.36■□□□□ 0.37
HMGCL-208ENST00000509389 TDO2P48775 406 aa17.36■□□□□ 0.37
HMGCL-208ENST00000509389 IGKV6D-41A0A0C4DH26 115 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 F5H6K3 240 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 APPP05067 770 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 RTP1P59025 263 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 KLRC3Q07444 240 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 KCTD2Q14681 263 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 ZNF792Q3KQV3 632 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 GPR153Q6NV75 609 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 SLF1Q9BQI6 1058 aa17.35■□□□□ 0.37
HMGCL-208ENST00000509389 DNAH12Q6ZR08 3092 aa17.34■□□□□ 0.37
HMGCL-208ENST00000509389 PATL2C9JE40 543 aaKnown RBP17.34■□□□□ 0.37
HMGCL-208ENST00000509389 KBTBD13C9JR72 458 aa17.34■□□□□ 0.37
HMGCL-208ENST00000509389 PRDM1O75626 825 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms