RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 ARHGEF6Q15052 776 aa21.51■■□□□ 1.03
CLDND1-220ENST00000508902 USP6NLQ92738 828 aa21.51■■□□□ 1.03
CLDND1-220ENST00000508902 CHMP4CQ96CF2 233 aa21.51■■□□□ 1.03
CLDND1-220ENST00000508902 PPP1R9AQ9ULJ8 1098 aa21.51■■□□□ 1.03
CLDND1-220ENST00000508902 SMCHD1A6NHR9 2005 aa21.51■■□□□ 1.03
CLDND1-220ENST00000508902 POTEFA5A3E0 1075 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 ZNF213O14771 459 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 RAD21O60216 631 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
CLDND1-220ENST00000508902 CYP21A2P08686 494 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 IRF5Q13568 498 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 MTFR1Q15390 333 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 SLC9C1Q4G0N8 1177 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 STOX1Q6ZVD7 989 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 GPR142Q7Z601 462 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 ESYT1Q9BSJ8 1104 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 MOV10L1Q9BXT6 1211 aaKnown RBP21.5■■□□□ 1.03
CLDND1-220ENST00000508902 LSG1Q9H089 658 aaKnown RBP21.5■■□□□ 1.03
CLDND1-220ENST00000508902 TOMM22Q9NS69 142 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 TCP11L1Q9NUJ3 509 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 SYNPO2Q9UMS6 1093 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 STX8Q9UNK0 236 aa21.5■■□□□ 1.03
CLDND1-220ENST00000508902 ZNFX1Q9P2E3 1918 aaKnown RBP21.49■■□□□ 1.03
CLDND1-220ENST00000508902 B4E1Z4 1266 aa21.49■■□□□ 1.03
CLDND1-220ENST00000508902 MORN1Q5T089 497 aa21.49■■□□□ 1.03
CLDND1-220ENST00000508902 SLFN13Q68D06 897 aa21.49■■□□□ 1.03
CLDND1-220ENST00000508902 SAMD1Q6SPF0 538 aaPredicted RBP21.49■■□□□ 1.03
CLDND1-220ENST00000508902 MFSD6Q6ZSS7 791 aa21.49■■□□□ 1.03
CLDND1-220ENST00000508902 RAET1EQ8TD07 263 aa21.49■■□□□ 1.03
CLDND1-220ENST00000508902 SPATC1LQ9H0A9 340 aa21.49■■□□□ 1.03
CLDND1-220ENST00000508902 ZNF214Q9UL59 606 aaPredicted RBP21.49■■□□□ 1.03
CLDND1-220ENST00000508902 VWA5AO00534 786 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 MYCP01106 439 aaPredicted RBP21.48■■□□□ 1.03
CLDND1-220ENST00000508902 HOXD10P28358 340 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 GRK4P32298 578 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 TRIM32Q13049 653 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 RUFY2Q8WXA3 655 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 COA7Q96BR5 231 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 TMEM47Q9BQJ4 181 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 ZKSCAN3Q9BRR0 538 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 HOXC10Q9NYD6 342 aa21.48■■□□□ 1.03
CLDND1-220ENST00000508902 ADCY3O60266 1144 aa21.47■■□□□ 1.03
CLDND1-220ENST00000508902 KDM4AO75164 1064 aa21.47■■□□□ 1.03
CLDND1-220ENST00000508902 PCP11498 1178 aaKnown RBP21.47■■□□□ 1.03
CLDND1-220ENST00000508902 MAPK4P31152 587 aa21.47■■□□□ 1.03
CLDND1-220ENST00000508902 RGS19P49795 217 aa21.47■■□□□ 1.03
CLDND1-220ENST00000508902 IMMTQ16891 758 aaKnown RBP21.47■■□□□ 1.03
CLDND1-220ENST00000508902 MAP4K1Q92918 833 aa21.47■■□□□ 1.03
CLDND1-220ENST00000508902 GMCL1Q96IK5 515 aa21.47■■□□□ 1.03
CLDND1-220ENST00000508902 MCCP23508 829 aa21.46■■□□□ 1.03
CLDND1-220ENST00000508902 CYB5R4Q7L1T6 521 aa21.46■■□□□ 1.03
CLDND1-220ENST00000508902 PLEKHH3Q7Z736 793 aa21.46■■□□□ 1.03
CLDND1-220ENST00000508902 TRIB2Q92519 343 aa21.46■■□□□ 1.03
CLDND1-220ENST00000508902 SLF1Q9BQI6 1058 aa21.46■■□□□ 1.03
CLDND1-220ENST00000508902 RNF41Q9H4P4 317 aaPredicted RBP21.46■■□□□ 1.03
CLDND1-220ENST00000508902 PPP4R2Q9NY27 417 aa21.46■■□□□ 1.03
CLDND1-220ENST00000508902 CTNNA3Q9UI47 895 aa21.46■■□□□ 1.03
CLDND1-220ENST00000508902 RBM8AQ9Y5S9 174 aaKnown RBP21.46■■□□□ 1.03
CLDND1-220ENST00000508902 BMP3P12645 472 aa21.45■■□□□ 1.02
CLDND1-220ENST00000508902 ERCC3P19447 782 aa21.45■■□□□ 1.02
CLDND1-220ENST00000508902 GRB14Q14449 540 aa21.45■■□□□ 1.02
CLDND1-220ENST00000508902 CCL14Q16627 93 aa21.45■■□□□ 1.02
CLDND1-220ENST00000508902 KCTD1Q719H9 257 aa21.45■■□□□ 1.02
CLDND1-220ENST00000508902 MB21D1Q8N884 522 aa21.45■■□□□ 1.02
CLDND1-220ENST00000508902 SLAIN1Q8ND83 568 aa21.45■■□□□ 1.02
CLDND1-220ENST00000508902 ZSWIM5Q9P217 1185 aa21.45■■□□□ 1.02
CLDND1-220ENST00000508902 PLXNA1Q9UIW2 1896 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 INHAP05111 366 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 CYP2B6P20813 491 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 PTPREP23469 700 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 TTBK2Q6IQ55 1244 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 PXYLP1Q8TE99 480 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 ESR2Q92731 530 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 FLRT1Q9NZU1 646 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 MTMR7Q9Y216 660 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 RIPK3Q9Y572 518 aa21.44■■□□□ 1.02
CLDND1-220ENST00000508902 U3KPZ7 1027 aaPredicted RBP21.44■■□□□ 1.02
CLDND1-220ENST00000508902 IGHA2P01877 340 aa21.43■■□□□ 1.02
CLDND1-220ENST00000508902 TOP1P11387 765 aaKnown RBP21.43■■□□□ 1.02
CLDND1-220ENST00000508902 TAL1P17542 331 aaPredicted RBP21.43■■□□□ 1.02
CLDND1-220ENST00000508902 ENAHQ8N8S7 591 aaPredicted RBP21.43■■□□□ 1.02
CLDND1-220ENST00000508902 SHCBP1Q8NEM2 672 aa21.43■■□□□ 1.02
CLDND1-220ENST00000508902 NPLOC4Q8TAT6 608 aa21.43■■□□□ 1.02
CLDND1-220ENST00000508902 KIFC2Q96AC6 838 aa21.43■■□□□ 1.02
CLDND1-220ENST00000508902 SHISA4Q96DD7 197 aa21.43■■□□□ 1.02
CLDND1-220ENST00000508902 LCTP09848 1927 aa21.43■■□□□ 1.02
CLDND1-220ENST00000508902 TMEM232C9JQI7 657 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 ZNF536O15090 1300 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 SNHG28P0DPA3 235 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 SLC1A4P43007 532 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 CCNA1P78396 465 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 PLS1Q14651 629 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 FRMPD3Q5JV73 1810 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 PDE4DIPQ5VU43 2346 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 ERICH6BQ5W0A0 696 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 SOCS4Q8WXH5 440 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 NUDT12Q9BQG2 462 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 UNC93B1Q9H1C4 597 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 SLC38A10Q9HBR0 1119 aa21.42■■□□□ 1.02
CLDND1-220ENST00000508902 SENP2Q9HC62 589 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms