RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
LIN54-206ENST00000506560 MPHOSPH10O00566 681 aaKnown RBP13.98□□□□□ -0.17
LIN54-206ENST00000506560 POLR2DO15514 142 aaKnown RBP13.98□□□□□ -0.17
LIN54-206ENST00000506560 PARP1P09874 1014 aaKnown RBP13.98□□□□□ -0.17
LIN54-206ENST00000506560 TOP1P11387 765 aaKnown RBP13.98□□□□□ -0.17
LIN54-206ENST00000506560 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
LIN54-206ENST00000506560 TTC38Q5R3I4 469 aa13.98□□□□□ -0.17
LIN54-206ENST00000506560 AOPEPQ8N6M6 819 aa13.98□□□□□ -0.17
LIN54-206ENST00000506560 PIGSQ96S52 555 aa13.98□□□□□ -0.17
LIN54-206ENST00000506560 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
LIN54-206ENST00000506560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
LIN54-206ENST00000506560 IGKV6D-41A0A0C4DH26 115 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 FAM237AA0A1B0GTK4 181 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 STXBP3O00186 592 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 PDHBP11177 359 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 CASP1P29466 404 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 MCM7P33993 719 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 PTGDRQ13258 359 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 SF3B2Q13435 895 aaKnown RBP13.97□□□□□ -0.17
LIN54-206ENST00000506560 IL17AQ16552 155 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 SERTAD1Q9UHV2 236 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 NOL7Q9UMY1 257 aaKnown RBP13.97□□□□□ -0.17
LIN54-206ENST00000506560 SRPRBQ9Y5M8 271 aaKnown RBP13.97□□□□□ -0.17
LIN54-206ENST00000506560 NOVP48745 357 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 TTBK2Q6IQ55 1244 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 KRBA2Q6ZNG9 492 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 BLIDQ8IZY5 108 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 GPCPD1Q9NPB8 672 aa13.97□□□□□ -0.17
LIN54-206ENST00000506560 CDC25AP30304 524 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 JAG1P78504 1218 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 ZSCAN29Q8IWY8 852 aaPredicted RBP13.96□□□□□ -0.17
LIN54-206ENST00000506560 TTLL6Q8N841 843 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 NRBP1Q9UHY1 535 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 SCAF8Q9UPN6 1271 aaKnown RBP13.96□□□□□ -0.17
LIN54-206ENST00000506560 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
LIN54-206ENST00000506560 VWA3AA6NCI4 1184 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 M0R2N6 131 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 C17orf53Q8N3J3 647 aaPredicted RBP13.96□□□□□ -0.17
LIN54-206ENST00000506560 CNNM3Q8NE01 707 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 NAP1L5Q96NT1 182 aaPredicted RBP13.96□□□□□ -0.17
LIN54-206ENST00000506560 BRMS1Q9HCU9 246 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 ANO10Q9NW15 660 aa13.96□□□□□ -0.17
LIN54-206ENST00000506560 BMP6P22004 513 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 SLC16A2P36021 539 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 CFAP100Q494V2 611 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 CCDC178Q5BJE1 867 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 PCDHA6Q9UN73 950 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 PCDHA4Q9UN74 947 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 ZKSCAN5Q9Y2L8 839 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 PCDHA8Q9Y5H6 950 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 CLRN2A0PK11 232 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 GDF11O95390 407 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 INF2Q27J81 1249 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 CDAN1Q8IWY9 1227 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 KLHL34Q8N239 644 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 SYMPKQ92797 1274 aaKnown RBP13.95□□□□□ -0.18
LIN54-206ENST00000506560 BARHL2Q9NY43 387 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 CCDC39Q9UFE4 941 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 PLIN4Q96Q06 1357 aa13.95□□□□□ -0.18
LIN54-206ENST00000506560 PSMD14O00487 310 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 RAD21O60216 631 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 GNAQP50148 359 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 MDM2Q00987 491 aaPredicted RBP13.94□□□□□ -0.18
LIN54-206ENST00000506560 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
LIN54-206ENST00000506560 STAMQ92783 540 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 COA7Q96BR5 231 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 MYH4Q9Y623 1939 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 KCTD1Q719H9 257 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 DHX58Q96C10 678 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 TIGD1Q96MW7 591 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 KCNF1Q9H3M0 494 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 SHTN1A0MZ66 631 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 ACTN4O43707 911 aaKnown RBP13.94□□□□□ -0.18
LIN54-206ENST00000506560 HLA-DOAP06340 250 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 ZNF75DP51815 510 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 NAPAP54920 295 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
LIN54-206ENST00000506560 HS1BP3Q53T59 392 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 CEP57L1Q8IYX8 460 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 LARGE2Q8N3Y3 721 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 TUBE1Q9UJT0 475 aa13.94□□□□□ -0.18
LIN54-206ENST00000506560 BECN2A8MW95 431 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 TTLL1O95922 423 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 MSNP26038 577 aaKnown RBP13.93□□□□□ -0.18
LIN54-206ENST00000506560 NLRP12P59046 1061 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 PLA2G4DQ86XP0 818 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 TMEM260Q9NX78 707 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
LIN54-206ENST00000506560 CEP131Q9UPN4 1083 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 TCP10L2B9ZVM9 353 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
LIN54-206ENST00000506560 SEPT2Q15019 361 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 CCDC93Q567U6 631 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 SIAH1Q8IUQ4 282 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 C4orf32Q8N8J7 132 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 IDI2Q9BXS1 227 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms