RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 RWDD1Q9H446 243 aaPredicted RBP12.42□□□□□ -0.42
NR1I3-222ENST00000506018 H0YGN5 161 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 MSCO60682 206 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 SLC25A27O95847 323 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 HOXC6P09630 235 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 RASA1P20936 1047 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 COPB2P35606 906 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 CACNB2Q08289 660 aaPredicted RBP12.41□□□□□ -0.42
NR1I3-222ENST00000506018 TRIM32Q13049 653 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 ZMYM1Q5SVZ6 1142 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 NCAPG2Q86XI2 1143 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 STK11IPQ8N1F8 1099 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 PAWRQ96IZ0 340 aaKnown RBP12.41□□□□□ -0.42
NR1I3-222ENST00000506018 NYAP2Q9P242 653 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 CTDP1Q9Y5B0 961 aaPredicted RBP12.41□□□□□ -0.42
NR1I3-222ENST00000506018 FRMPD3Q5JV73 1810 aa12.41□□□□□ -0.42
NR1I3-222ENST00000506018 TSPY3P0CV98 308 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 ERCC3P19447 782 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 CCL14Q16627 93 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 HABP4Q5JVS0 413 aaKnown RBP12.4□□□□□ -0.42
NR1I3-222ENST00000506018 POTEEQ6S8J3 1075 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 ABRAQ8N0Z2 381 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 OTUD7AQ8TE49 926 aaPredicted RBP12.4□□□□□ -0.42
NR1I3-222ENST00000506018 ATG4CQ96DT6 458 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 C11orf49Q9H6J7 331 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 OGDHLQ9ULD0 1010 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 SYNPO2Q9UMS6 1093 aa12.4□□□□□ -0.42
NR1I3-222ENST00000506018 PLXNA1Q9UIW2 1896 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 SMIM22K7EJ46 135 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 TTLL1O95922 423 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 FCER1AP12319 257 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 ADORA2AP29274 412 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 CNGA1P29973 690 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 PDE1AP54750 535 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 PPARAQ07869 468 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 KIAA1755Q5JYT7 1200 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 FAM83BQ5T0W9 1011 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 EPB41L4AQ9HCS5 686 aaPredicted RBP12.39□□□□□ -0.43
NR1I3-222ENST00000506018 STAP2Q9UGK3 403 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
NR1I3-222ENST00000506018 ALPK3Q96L96 1907 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 F5H6K3 240 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 CCND3P30281 292 aaPredicted RBP12.38□□□□□ -0.43
NR1I3-222ENST00000506018 KLRC3Q07444 240 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 KCTD2Q14681 263 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 OLFML2BQ68BL8 750 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
NR1I3-222ENST00000506018 SLF1Q9BQI6 1058 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 HELLSQ9NRZ9 838 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 CLIP2Q9UDT6 1046 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 SALL3Q9BXA9 1300 aa12.38□□□□□ -0.43
NR1I3-222ENST00000506018 TRIM6-TRIM34B2RNG4 842 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 VWA5AO00534 786 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 PRDM1O75626 825 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 STAT3P40763 770 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 MFAP1P55081 439 aaKnown RBP12.37□□□□□ -0.43
NR1I3-222ENST00000506018 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 RIOX2Q8IUF8 465 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
NR1I3-222ENST00000506018 NPLOC4Q8TAT6 608 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 MMP19Q99542 508 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.37□□□□□ -0.43
NR1I3-222ENST00000506018 ADAMTS5Q9UNA0 930 aa12.37□□□□□ -0.43
NR1I3-222ENST00000506018 COLQQ9Y215 455 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-222ENST00000506018 PLIN4Q96Q06 1357 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 TSPY2A6NKD2 308 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 ZBED4O75132 1171 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 CYP2C19P33261 490 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 TFAP4Q01664 338 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 TMEM132BQ14DG7 1078 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 NEDD1Q8NHV4 660 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 DIS3LQ8TF46 1054 aaKnown RBP12.36□□□□□ -0.43
NR1I3-222ENST00000506018 MKL1Q969V6 931 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 CEP95Q96GE4 821 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 LNPKQ9C0E8 428 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 FBXO28Q9NVF7 368 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 MTMR4Q9NYA4 1195 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 FLRT1Q9NZU1 646 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 DDX20Q9UHI6 824 aaKnown RBP12.36□□□□□ -0.43
NR1I3-222ENST00000506018 FEM1BQ9UK73 627 aa12.36□□□□□ -0.43
NR1I3-222ENST00000506018 ISY1Q9ULR0 285 aaKnown RBP12.36□□□□□ -0.43
NR1I3-222ENST00000506018 IGKV6D-41A0A0C4DH26 115 aa12.35□□□□□ -0.43
NR1I3-222ENST00000506018 NDUFB10O96000 172 aa12.35□□□□□ -0.43
NR1I3-222ENST00000506018 FDX1P10109 184 aa12.35□□□□□ -0.43
NR1I3-222ENST00000506018 MCMDC2Q4G0Z9 681 aa12.35□□□□□ -0.43
NR1I3-222ENST00000506018 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
NR1I3-222ENST00000506018 SMC5Q8IY18 1101 aa12.35□□□□□ -0.43
NR1I3-222ENST00000506018 GMCL1P1Q8NEA9 526 aa12.35□□□□□ -0.43
NR1I3-222ENST00000506018 RILPL2Q969X0 211 aa12.35□□□□□ -0.43
NR1I3-222ENST00000506018 CYBAP13498 195 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 IKQ13123 557 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-222ENST00000506018 FAM47AQ5JRC9 791 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 LHX8Q68G74 356 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 SNRNP48Q6IEG0 339 aaKnown RBP12.34□□□□□ -0.43
NR1I3-222ENST00000506018 CCDC129Q6ZRS4 1044 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms