RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 AMOTL1Q8IY63 956 aa10.35□□□□□ -0.75
LINC02239-201ENST00000504339 SYMPKQ92797 1274 aaKnown RBP10.35□□□□□ -0.75
LINC02239-201ENST00000504339 RGS17Q9UGC6 210 aaPredicted RBP10.35□□□□□ -0.75
LINC02239-201ENST00000504339 CEP131Q9UPN4 1083 aa10.35□□□□□ -0.75
LINC02239-201ENST00000504339 SUGT1Q9Y2Z0 365 aa10.35□□□□□ -0.75
LINC02239-201ENST00000504339 PARP3Q9Y6F1 533 aa10.35□□□□□ -0.75
LINC02239-201ENST00000504339 ADAMTSL1Q8N6G6 1762 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 IGKV6D-41A0A0C4DH26 115 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 KLRF2D3W0D1 207 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 IKBKBO14920 756 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 TPM3P06753 285 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 CASP1P29466 404 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 FMR1Q06787 632 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC02239-201ENST00000504339 NFIAQ12857 509 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 SLF2Q8IX21 1173 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 DRC7Q8IY82 874 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 BLIDQ8IZY5 108 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 DBNDD1Q9H9R9 158 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 SH3GLB2Q9NR46 395 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 BARHL2Q9NY43 387 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 FAM13BQ9NYF5 915 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 PCDHA6Q9UN73 950 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 PCDHA4Q9UN74 947 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 PCDHA8Q9Y5H6 950 aa10.34□□□□□ -0.75
LINC02239-201ENST00000504339 GOLGA6L6A8MZA4 724 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 DYNC1I1O14576 645 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 AKR1B1P15121 316 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 LMOD1P29536 600 aaPredicted RBP10.33□□□□□ -0.76
LINC02239-201ENST00000504339 CHRNA5P30532 468 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 MORC3Q14149 939 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 CCDC178Q5BJE1 867 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 FLAD1Q8NFF5 587 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 C7orf43Q8WVR3 580 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 DPF2Q92785 391 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 ZNF622Q969S3 477 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC02239-201ENST00000504339 MTRQ99707 1265 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 XPO4Q9C0E2 1151 aaKnown RBP10.33□□□□□ -0.76
LINC02239-201ENST00000504339 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 VWA3AA6NCI4 1184 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 USP17L5A8MUK1 530 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 MCM7P33993 719 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 SHMT1P34896 483 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 TRAPPC10P48553 1259 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 E2F4Q16254 413 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 C2CD5Q86YS7 1000 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 LRRC8AQ8IWT6 810 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 FERMT2Q96AC1 680 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 DHX58Q96C10 678 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 SPZ1Q9BXG8 430 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 PDGFDQ9GZP0 370 aaPredicted RBP10.33□□□□□ -0.76
LINC02239-201ENST00000504339 BRMS1Q9HCU9 246 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 USP40Q9NVE5 1235 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 MTMR4Q9NYA4 1195 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 IFNKQ9P0W0 207 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 FOCADQ5VW36 1801 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 PLIN4Q96Q06 1357 aa10.33□□□□□ -0.76
LINC02239-201ENST00000504339 SLFN14P0C7P3 912 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 TOP1P11387 765 aaKnown RBP10.32□□□□□ -0.76
LINC02239-201ENST00000504339 RXRBP28702 533 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 GNAQP50148 359 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 HEATR3Q7Z4Q2 680 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 DAGLBQ8NCG7 672 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 PAGE5Q96GU1 130 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 TMEM60Q9H2L4 133 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 DNAJC18Q9H819 358 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 ZNF287Q9HBT7 754 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 MYH1P12882 1939 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 PDHBP11177 359 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 CALML3P27482 149 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 CDC25AP30304 524 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 CCZ1BP86790 482 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 CCZ1P86791 482 aaPredicted RBP10.32□□□□□ -0.76
LINC02239-201ENST00000504339 MYL5Q02045 173 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 ZRSR1Q15695 479 aaKnown RBP10.32□□□□□ -0.76
LINC02239-201ENST00000504339 SHROOM1Q2M3G4 852 aaPredicted RBP10.32□□□□□ -0.76
LINC02239-201ENST00000504339 HHIPL2Q6UWX4 724 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 FILIP1Q7Z7B0 1213 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 MAP7D2Q96T17 732 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 UBA5Q9GZZ9 404 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 OSBPL5Q9H0X9 879 aaPredicted RBP10.32□□□□□ -0.76
LINC02239-201ENST00000504339 INTS13Q9NVM9 706 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 FANCLQ9NW38 375 aa10.32□□□□□ -0.76
LINC02239-201ENST00000504339 TNS1Q9HBL0 1735 aaKnown RBP10.31□□□□□ -0.76
LINC02239-201ENST00000504339 SLX4Q8IY92 1834 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 EDIL3O43854 480 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 BMP15O95972 392 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 PARP1P09874 1014 aaKnown RBP10.31□□□□□ -0.76
LINC02239-201ENST00000504339 SNHG28P0DPA3 235 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 HMGB2P26583 209 aaKnown RBP10.31□□□□□ -0.76
LINC02239-201ENST00000504339 CACNB3P54284 484 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 FANCCQ00597 558 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 EZH2Q15910 746 aaKnown RBP10.31□□□□□ -0.76
LINC02239-201ENST00000504339 DACT2Q5SW24 774 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 LRRC15Q8TF66 581 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 ZMYND12Q9H0C1 365 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 SCN9AQ15858 1988 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 SMTNL1A8MU46 457 aa10.31□□□□□ -0.76
LINC02239-201ENST00000504339 CD44P16070 742 aaKnown RBP10.31□□□□□ -0.76
LINC02239-201ENST00000504339 AFMP43652 599 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms