RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 PCDHA4Q9UN74 947 aa20.5■□□□□ 0.87
SDHA-204ENST00000504309 SCN9AQ15858 1988 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 F8W031 263 aaPredicted RBP20.49■□□□□ 0.87
SDHA-204ENST00000504309 NPR1P16066 1061 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 TMC6Q7Z403 805 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 IMPACTQ9P2X3 320 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 GOLGB1Q14789 3259 aaKnown RBP20.49■□□□□ 0.87
SDHA-204ENST00000504309 M0R2N6 131 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 GSDMDP57764 484 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 CEP95Q96GE4 821 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 PRIMPOLQ96LW4 560 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 CPVLQ9H3G5 476 aa20.49■□□□□ 0.87
SDHA-204ENST00000504309 GREB1LQ9C091 1923 aaPredicted RBP20.48■□□□□ 0.87
SDHA-204ENST00000504309 SLFN14P0C7P3 912 aa20.48■□□□□ 0.87
SDHA-204ENST00000504309 SKILP12757 684 aa20.48■□□□□ 0.87
SDHA-204ENST00000504309 PICALMQ13492 652 aa20.48■□□□□ 0.87
SDHA-204ENST00000504309 IL17AQ16552 155 aa20.48■□□□□ 0.87
SDHA-204ENST00000504309 TRIML1Q8N9V2 468 aa20.48■□□□□ 0.87
SDHA-204ENST00000504309 DPF2Q92785 391 aa20.48■□□□□ 0.87
SDHA-204ENST00000504309 MXD3Q9BW11 206 aa20.48■□□□□ 0.87
SDHA-204ENST00000504309 FANCLQ9NW38 375 aa20.48■□□□□ 0.87
SDHA-204ENST00000504309 STXBP3O00186 592 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 PLSCR1O15162 318 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 FMR1Q06787 632 aaKnown RBP eCLIP20.47■□□□□ 0.871e-7■■■□□ 16.8
SDHA-204ENST00000504309 HEATR3Q7Z4Q2 680 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 SH3RF1Q7Z6J0 888 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 ZC3H12CQ9C0D7 883 aaKnown RBP20.47■□□□□ 0.87
SDHA-204ENST00000504309 BARHL2Q9NY43 387 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 SIPA1L1O43166 1804 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 SLX4Q8IY92 1834 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 KLRF2D3W0D1 207 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 APBA3O96018 575 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 MMP10P09238 476 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 AFMP43652 599 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 MLKLQ8NB16 471 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 MYRIPQ8NFW9 859 aa20.47■□□□□ 0.87
SDHA-204ENST00000504309 C16orf45Q96MC5 204 aaPredicted RBP20.47■□□□□ 0.87
SDHA-204ENST00000504309 HMGB2P26583 209 aaKnown RBP20.46■□□□□ 0.87
SDHA-204ENST00000504309 CASP1P29466 404 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 DOK7Q18PE1 504 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 DPP8Q6V1X1 898 aaPredicted RBP20.46■□□□□ 0.87
SDHA-204ENST00000504309 DAGLBQ8NCG7 672 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 CCDC148Q8NFR7 591 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 PAGE5Q96GU1 130 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 SPZ1Q9BXG8 430 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 DDX4Q9NQI0 724 aaKnown RBP20.46■□□□□ 0.87
SDHA-204ENST00000504309 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 SERPINC1P01008 464 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 UBASH3AP57075 661 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 ARMCX5Q6P1M9 558 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 USP17L2Q6R6M4 530 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 TRMT44Q8IYL2 757 aaKnown RBP20.46■□□□□ 0.87
SDHA-204ENST00000504309 PCDHA6Q9UN73 950 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 TTF2Q9UNY4 1162 aaKnown RBP20.46■□□□□ 0.87
SDHA-204ENST00000504309 SUGT1Q9Y2Z0 365 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 PCDHA8Q9Y5H6 950 aa20.46■□□□□ 0.87
SDHA-204ENST00000504309 RGPD3A6NKT7 1758 aaPredicted RBP20.45■□□□□ 0.86
SDHA-204ENST00000504309 RGPD4Q7Z3J3 1758 aa20.45■□□□□ 0.86
SDHA-204ENST00000504309 USP27XA6NNY8 438 aa20.45■□□□□ 0.86
SDHA-204ENST00000504309 PARP1P09874 1014 aaKnown RBP20.45■□□□□ 0.86
SDHA-204ENST00000504309 NOVP48745 357 aa20.45■□□□□ 0.86
SDHA-204ENST00000504309 E2F4Q16254 413 aa20.45■□□□□ 0.86
SDHA-204ENST00000504309 C4orf32Q8N8J7 132 aa20.45■□□□□ 0.86
SDHA-204ENST00000504309 LZTS2Q9BRK4 669 aa20.45■□□□□ 0.86
SDHA-204ENST00000504309 DACH1Q9UI36 760 aa20.45■□□□□ 0.86
SDHA-204ENST00000504309 CCDC194A0A1B0GVG4 234 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 TOP1P11387 765 aaKnown RBP20.44■□□□□ 0.86
SDHA-204ENST00000504309 ALDH1B1P30837 517 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 PDE6BP35913 854 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 HSP90AA4PQ58FG1 418 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 MSL1Q68DK7 614 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 MED15Q96RN5 788 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 MYO1BO43795 1136 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 SCNN1DP51172 638 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 GABPAQ06546 454 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 DPYDQ12882 1025 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 CFAP100Q494V2 611 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 CCDC150Q8NCX0 1101 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 CCDC34Q96HJ3 373 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 NFE2L3Q9Y4A8 694 aa20.44■□□□□ 0.86
SDHA-204ENST00000504309 ARL6IP4Q66PJ3 421 aaKnown RBP20.43■□□□□ 0.86
SDHA-204ENST00000504309 MASTLQ96GX5 879 aa20.43■□□□□ 0.86
SDHA-204ENST00000504309 PARP3Q9Y6F1 533 aa20.43■□□□□ 0.86
SDHA-204ENST00000504309 CBFA2T2O43439 604 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 ZNF18P17022 549 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 INF2Q27J81 1249 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 GALNT17Q6IS24 598 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 HOMER1Q86YM7 354 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 ENOX1Q8TC92 643 aaKnown RBP20.42■□□□□ 0.86
SDHA-204ENST00000504309 INTS13Q9NVM9 706 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 TMEM232C9JQI7 657 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 DYNC1I1O14576 645 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 TPD52L1Q16890 204 aaPredicted RBP20.42■□□□□ 0.86
SDHA-204ENST00000504309 PDXDC2PQ6P474 469 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 STAMQ92783 540 aa20.42■□□□□ 0.86
SDHA-204ENST00000504309 USP17L5A8MUK1 530 aa20.41■□□□□ 0.86
SDHA-204ENST00000504309 SFPQP23246 707 aaKnown RBP eCLIP20.41■□□□□ 0.86
SDHA-204ENST00000504309 PTPN21Q16825 1174 aa20.41■□□□□ 0.86
SDHA-204ENST00000504309 CLEC10AQ8IUN9 316 aa20.41■□□□□ 0.86
SDHA-204ENST00000504309 ZMYND12Q9H0C1 365 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms