RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 TOP1P11387 765 aaKnown RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 EEF2P13639 858 aaKnown RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 ZNF280AP59817 542 aaPredicted RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 ZSCAN23Q3MJ62 389 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 KIAA1755Q5JYT7 1200 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 METTL16Q86W50 562 aaKnown RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 DIS3L2Q8IYB7 885 aaKnown RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 TRIM22Q8IYM9 498 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 MTMR14Q8NCE2 650 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 DHX36Q9H2U1 1008 aaKnown RBP8.45□□□□□ -1.06
CPNE4-202ENST00000502818 GOLPH3LQ9H4A5 285 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 ZNF287Q9HBT7 754 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 GPCPD1Q9NPB8 672 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 SWAP70Q9UH65 585 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 KIF3AQ9Y496 699 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 MRVI1Q9Y6F6 885 aa8.45□□□□□ -1.06
CPNE4-202ENST00000502818 A0A1W2PRG0 241 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 NPM3O75607 178 aaKnown RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 TAL1P17542 331 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 U2AF2P26368 475 aaKnown RBP eCLIP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 SLC16A2P36021 539 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 EPS15P42566 896 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 HIRAP54198 1017 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 UBE2HP62256 183 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 TNIP1Q15025 636 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 SKOR2Q2VWA4 1001 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 KCTD1Q719H9 257 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 FAM151AQ8WW52 585 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 NUP88Q99567 741 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 PHF20Q9BVI0 1012 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 GRPEL1Q9HAV7 217 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 RCOR1Q9UKL0 485 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 RAD21O60216 631 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 DDNO94850 711 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 TTLL1O95922 423 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 SCG2P13521 617 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 ATP2B1P20020 1258 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 MARCKSP29966 332 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 ECE1P42892 770 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 SNAP25P60880 206 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 PFKFB3Q16875 520 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 WWC2Q6AWC2 1192 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 FOXP4Q8IVH2 680 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 LINC00301Q8NCQ3 95 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 ACER1Q8TDN7 264 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 TEPSINQ96N21 525 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 MAP3K14Q99558 947 aa8.44□□□□□ -1.06
CPNE4-202ENST00000502818 GLIS2Q9BZE0 524 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.44□□□□□ -1.06
CPNE4-202ENST00000502818 SYCE3A1L190 88 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 PARP1P09874 1014 aaKnown RBP8.43□□□□□ -1.06
CPNE4-202ENST00000502818 GRIN1Q05586 938 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 RASA3Q14644 834 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 SF3A1Q15459 793 aaKnown RBP8.43□□□□□ -1.06
CPNE4-202ENST00000502818 ABCB5Q2M3G0 1257 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 HOMER1Q86YM7 354 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 PIGSQ96S52 555 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 RTEL1Q9NZ71 1219 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 HACL1Q9UJ83 578 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 PCDHA7Q9UN72 937 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 GREB1LQ9C091 1923 aaPredicted RBP8.43□□□□□ -1.06
CPNE4-202ENST00000502818 ARFGEF1Q9Y6D6 1849 aa8.43□□□□□ -1.06
CPNE4-202ENST00000502818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.42□□□□□ -1.06
CPNE4-202ENST00000502818 PPP1R11O60927 126 aaPredicted RBP8.42□□□□□ -1.06
CPNE4-202ENST00000502818 NR1I2O75469 434 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 SNHG28P0DPA3 235 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 PDIA4P13667 645 aaKnown RBP8.42□□□□□ -1.06
CPNE4-202ENST00000502818 KIF5BP33176 963 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 AKAP17AQ02040 695 aaKnown RBP8.42□□□□□ -1.06
CPNE4-202ENST00000502818 DGKZQ13574 1117 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 TRIM29Q14134 588 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 PPP2R5BQ15173 497 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 PTPAQ15257 358 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 KIF4BQ2VIQ3 1234 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 CCDC178Q5BJE1 867 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 NOSTRINQ8IVI9 506 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 TRIM34Q9BYJ4 488 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 SCAND2PQ9GZW5 306 aaPredicted RBP8.42□□□□□ -1.06
CPNE4-202ENST00000502818 CABP5Q9NP86 173 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 TMOD2Q9NZR1 351 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 PCDHB6Q9Y5E3 794 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 ELP1O95163 1332 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 STXBP3O00186 592 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 LMNB1P20700 586 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 PTMSP20962 102 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 TERF1P54274 439 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 ICA1Q05084 483 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 ZNF543Q08ER8 600 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 GNL2Q13823 731 aaKnown RBP8.42□□□□□ -1.06
CPNE4-202ENST00000502818 CAMK4Q16566 473 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 ANO1Q5XXA6 986 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 HEATR3Q7Z4Q2 680 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 BRAPQ7Z569 592 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 SPICE1Q8N0Z3 855 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 WASF1Q92558 559 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 CLIC6Q96NY7 704 aa8.42□□□□□ -1.06
CPNE4-202ENST00000502818 MYH15Q9Y2K3 1946 aa8.41□□□□□ -1.06
CPNE4-202ENST00000502818 A0A087WWV3 80 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms