RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SPEF2Q9C093 1822 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 CCDC163A0A0D9SF12 145 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 KLF18A0A0U1RQI7 1052 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 A0A1B0GVL5 298 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 ANTXR2P58335 489 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 EN1Q05925 392 aaPredicted RBP10.22□□□□□ -0.77
FN1-227ENST00000498719 EHHADHQ08426 723 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 ZSCAN25Q6NSZ9 544 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 FSIP1Q8NA03 581 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 CACTINQ8WUQ7 758 aaKnown RBP10.22□□□□□ -0.77
FN1-227ENST00000498719 TMOD3Q9NYL9 352 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 HDAC9Q9UKV0 1011 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 PCDHA7Q9UN72 937 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 HPS5Q9UPZ3 1129 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 TNS2Q63HR2 1409 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 GOLGA8BA8MQT2 603 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 GPAA1O43292 621 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 DKK1O94907 266 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 GJA5P36382 358 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 MCAMP43121 646 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 PAK2Q13177 524 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 IFIT5Q13325 482 aaKnown RBP10.22□□□□□ -0.77
FN1-227ENST00000498719 IMMTQ16891 758 aaKnown RBP10.22□□□□□ -0.77
FN1-227ENST00000498719 PADI6Q6TGC4 694 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 CCDC73Q6ZRK6 1079 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 CCDC89Q8N998 374 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 PIGBQ92521 554 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 ERP27Q96DN0 273 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 C16orf45Q96MC5 204 aaPredicted RBP10.22□□□□□ -0.77
FN1-227ENST00000498719 CARD10Q9BWT7 1032 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 GREM2Q9H772 168 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 CLIC4Q9Y696 253 aa10.22□□□□□ -0.77
FN1-227ENST00000498719 KINO60870 393 aaKnown RBP10.21□□□□□ -0.77
FN1-227ENST00000498719 IGHA2P01877 340 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 TPM3P06753 285 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 RXRAP19793 462 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 GPSM2P81274 684 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 SLC4A8Q2Y0W8 1093 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 MB21D2Q8IYB1 491 aaPredicted RBP10.21□□□□□ -0.77
FN1-227ENST00000498719 APPBP2Q92624 585 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 ZNF396Q96N95 335 aaPredicted RBP10.21□□□□□ -0.77
FN1-227ENST00000498719 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 AKAP2Q9Y2D5 859 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 KIF3AQ9Y496 699 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 PPP2R3BQ9Y5P8 575 aa10.21□□□□□ -0.77
FN1-227ENST00000498719 RIC1Q4ADV7 1423 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 GOLGA6L19H0YKK7 550 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 PCCAP05165 728 aaPredicted RBP10.21□□□□□ -0.78
FN1-227ENST00000498719 FBXO45P0C2W1 286 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 ITGA6P23229 1130 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 ETFBP38117 255 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 FAM160A1Q05DH4 1040 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 ATP2B3Q16720 1220 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 METTL24Q5JXM2 366 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 LDHAL6AQ6ZMR3 332 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.21□□□□□ -0.78
FN1-227ENST00000498719 AIFM3Q96NN9 605 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 NBPF3Q9H094 633 aa10.21□□□□□ -0.78
FN1-227ENST00000498719 KIF28PB7ZC32 967 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 CSF1RP07333 972 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 RBP3P10745 1247 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 NDUFA8P51970 172 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 EVCP57679 992 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 STX1AQ16623 288 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 KIF6Q6ZMV9 814 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 DHX40Q8IX18 779 aaKnown RBP10.2□□□□□ -0.78
FN1-227ENST00000498719 ZBTB38Q8NAP3 1195 aaPredicted RBP10.2□□□□□ -0.78
FN1-227ENST00000498719 TTC8Q8TAM2 541 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 C8orf76Q96K31 380 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 TMX1Q9H3N1 280 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 CLIC5Q9NZA1 410 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 ORC3Q9UBD5 711 aaPredicted RBP10.2□□□□□ -0.78
FN1-227ENST00000498719 GJA3Q9Y6H8 435 aa10.2□□□□□ -0.78
FN1-227ENST00000498719 ZNF213O14771 459 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 MAP3K13O43283 966 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 MZF1P28698 734 aaPredicted RBP10.19□□□□□ -0.78
FN1-227ENST00000498719 MCL1Q07820 350 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 IFNL3Q8IZI9 196 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 FMR1NBQ8N0W7 255 aaPredicted RBP10.19□□□□□ -0.78
FN1-227ENST00000498719 LINC00301Q8NCQ3 95 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 TTLL11Q8NHH1 800 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 BCL2L12Q9HB09 334 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 SENP2Q9HC62 589 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 INCENPQ9NQS7 918 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 CTNNA3Q9UI47 895 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 DAAM1Q9Y4D1 1078 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 BICDL2A1A5D9 508 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 BECN2A8MW95 431 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 SNAP23O00161 211 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 IDH1O75874 414 aaKnown RBP10.19□□□□□ -0.78
FN1-227ENST00000498719 ZFYP08048 801 aaPredicted RBP10.19□□□□□ -0.78
FN1-227ENST00000498719 CTHP32929 405 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 SLC9C2Q5TAH2 1124 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 RALYLQ86SE5 291 aaKnown RBP10.19□□□□□ -0.78
FN1-227ENST00000498719 AOPEPQ8N6M6 819 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 FBXO18Q8NFZ0 1043 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 NCOA7Q8NI08 942 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 HLA-CQ95604 372 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms