RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 EPB41L4AQ9HCS5 686 aaPredicted RBP20.21■□□□□ 0.83
CDKN2A-209ENST00000498628 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
CDKN2A-209ENST00000498628 PPP1R9AQ9ULJ8 1098 aa20.21■□□□□ 0.83
CDKN2A-209ENST00000498628 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
CDKN2A-209ENST00000498628 MKI67P46013 3256 aaKnown RBP20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 TSPY3P0CV98 308 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 TSPY8P0CW00 308 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 CNGA1P29973 690 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 CCND3P30281 292 aaPredicted RBP20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 PDE1AP54750 535 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 FAM83BQ5T0W9 1011 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 OLFML2BQ68BL8 750 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 SYNPO2Q9UMS6 1093 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 ADAMTS5Q9UNA0 930 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 SALL3Q9BXA9 1300 aa20.2■□□□□ 0.82
CDKN2A-209ENST00000498628 F5H6K3 240 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 VWA5AO00534 786 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 PRDM1O75626 825 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 TTLL1O95922 423 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 STAT3P40763 770 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 KLRC3Q07444 240 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 PPARAQ07869 468 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 TMEM132BQ14DG7 1078 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 CHRDL2Q6WN34 429 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 NPLOC4Q8TAT6 608 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 DIS3LQ8TF46 1054 aaKnown RBP20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 SLF1Q9BQI6 1058 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 HELLSQ9NRZ9 838 aa20.19■□□□□ 0.82
CDKN2A-209ENST00000498628 RIOX2Q8IUF8 465 aa20.18■□□□□ 0.82
CDKN2A-209ENST00000498628 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
CDKN2A-209ENST00000498628 NEDD1Q8NHV4 660 aa20.18■□□□□ 0.82
CDKN2A-209ENST00000498628 MKL1Q969V6 931 aa20.18■□□□□ 0.82
CDKN2A-209ENST00000498628 MMP19Q99542 508 aa20.18■□□□□ 0.82
CDKN2A-209ENST00000498628 MTMR4Q9NYA4 1195 aa20.18■□□□□ 0.82
CDKN2A-209ENST00000498628 FLRT1Q9NZU1 646 aa20.18■□□□□ 0.82
CDKN2A-209ENST00000498628 ZBED4O75132 1171 aa20.17■□□□□ 0.82
CDKN2A-209ENST00000498628 TFAP4Q01664 338 aa20.17■□□□□ 0.82
CDKN2A-209ENST00000498628 KCTD2Q14681 263 aa20.17■□□□□ 0.82
CDKN2A-209ENST00000498628 LHX8Q68G74 356 aa20.17■□□□□ 0.82
CDKN2A-209ENST00000498628 FBXO28Q9NVF7 368 aa20.17■□□□□ 0.82
CDKN2A-209ENST00000498628 PCDH10Q9P2E7 1040 aa20.17■□□□□ 0.82
CDKN2A-209ENST00000498628 DDX20Q9UHI6 824 aaKnown RBP20.17■□□□□ 0.82
CDKN2A-209ENST00000498628 IGKV6D-41A0A0C4DH26 115 aa20.16■□□□□ 0.82
CDKN2A-209ENST00000498628 TRIM6-TRIM34B2RNG4 842 aa20.16■□□□□ 0.82
CDKN2A-209ENST00000498628 NDUFB10O96000 172 aa20.16■□□□□ 0.82
CDKN2A-209ENST00000498628 CYP2C19P33261 490 aa20.16■□□□□ 0.82
CDKN2A-209ENST00000498628 CEP95Q96GE4 821 aa20.16■□□□□ 0.82
CDKN2A-209ENST00000498628 FEM1BQ9UK73 627 aa20.16■□□□□ 0.82
CDKN2A-209ENST00000498628 COBLO75128 1261 aa20.15■□□□□ 0.82
CDKN2A-209ENST00000498628 MCMDC2Q4G0Z9 681 aa20.15■□□□□ 0.82
CDKN2A-209ENST00000498628 GMCL1P1Q8NEA9 526 aa20.15■□□□□ 0.82
CDKN2A-209ENST00000498628 TEX13BQ9BXU2 312 aa20.15■□□□□ 0.82
CDKN2A-209ENST00000498628 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
CDKN2A-209ENST00000498628 DIS3Q9Y2L1 958 aaKnown RBP20.15■□□□□ 0.82
CDKN2A-209ENST00000498628 A0A0G2JMZ2 1700 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 TSPY2A6NKD2 308 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 FDX1P10109 184 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 MNX1P50219 401 aaPredicted RBP20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 SLFN13Q68D06 897 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 C7orf61Q8IZ16 206 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 ARRDC4Q8NCT1 418 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 NUP88Q99567 741 aaPredicted RBP20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 NRBP1Q9UHY1 535 aa20.14■□□□□ 0.81
CDKN2A-209ENST00000498628 PLIN4Q96Q06 1357 aa20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 MFAP1P55081 439 aaKnown RBP20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 ALX1Q15699 326 aa20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 FAM47AQ5JRC9 791 aa20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 CCDC129Q6ZRS4 1044 aa20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 RILPL2Q969X0 211 aa20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 MAML3Q96JK9 1138 aa20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 ZNF214Q9UL59 606 aaPredicted RBP20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 ISY1Q9ULR0 285 aaKnown RBP20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 RLFQ13129 1914 aa20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 ZNF236Q9UL36 1845 aa20.13■□□□□ 0.81
CDKN2A-209ENST00000498628 A0A1W2PPC1 479 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 SEPT4O43236 478 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 COL6A1P12109 1028 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 BMP3P12645 472 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 CYBAP13498 195 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 SNRNP48Q6IEG0 339 aaKnown RBP20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 CHD1LQ86WJ1 897 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 REPS2Q8NFH8 660 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 CHURC1Q8WUH1 139 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 KIFC2Q96AC6 838 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 DDX11Q96FC9 970 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 ANAPC4Q9UJX5 808 aa20.12■□□□□ 0.81
CDKN2A-209ENST00000498628 ATP2A1O14983 1001 aa20.11■□□□□ 0.81
CDKN2A-209ENST00000498628 RANBP6O60518 1105 aaKnown RBP20.11■□□□□ 0.81
CDKN2A-209ENST00000498628 IGHA2P01877 340 aa20.11■□□□□ 0.81
CDKN2A-209ENST00000498628 FXR1P51114 621 aaKnown RBP eCLIP20.11■□□□□ 0.81
CDKN2A-209ENST00000498628 LRRC47Q8N1G4 583 aaKnown RBP20.11■□□□□ 0.81
CDKN2A-209ENST00000498628 FBXO40Q9UH90 709 aa20.11■□□□□ 0.81
CDKN2A-209ENST00000498628 STX8Q9UNK0 236 aa20.11■□□□□ 0.81
CDKN2A-209ENST00000498628 GREB1LQ9C091 1923 aaPredicted RBP20.11■□□□□ 0.81
CDKN2A-209ENST00000498628 DNM1LO00429 736 aa20.1■□□□□ 0.81
CDKN2A-209ENST00000498628 SLC4A3P48751 1232 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms