RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 MAGEA10P43363 369 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-208ENST00000496375 NUCB1Q02818 461 aa17.21■□□□□ 0.35
CXCL12-208ENST00000496375 LRRC26Q2I0M4 334 aa17.21■□□□□ 0.35
CXCL12-208ENST00000496375 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
CXCL12-208ENST00000496375 OLFML2BQ68BL8 750 aa17.21■□□□□ 0.35
CXCL12-208ENST00000496375 APPBP2Q92624 585 aa17.21■□□□□ 0.35
CXCL12-208ENST00000496375 OSBP2Q969R2 916 aa17.21■□□□□ 0.35
CXCL12-208ENST00000496375 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-208ENST00000496375 GSG1L2A8MUP6 293 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
CXCL12-208ENST00000496375 RAD21O60216 631 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 COBLO75128 1261 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 TMEM132BQ14DG7 1078 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 SBK1Q52WX2 424 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 GIMAP6Q6P9H5 292 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 ABRAQ8N0Z2 381 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 STK11IPQ8N1F8 1099 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 LRCH3Q96II8 777 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.2■□□□□ 0.34
CXCL12-208ENST00000496375 GOPCQ9HD26 462 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 FBXO28Q9NVF7 368 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 SLC5A4Q9NY91 659 aa17.2■□□□□ 0.34
CXCL12-208ENST00000496375 GREB1LQ9C091 1923 aaPredicted RBP17.19■□□□□ 0.34
CXCL12-208ENST00000496375 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
CXCL12-208ENST00000496375 MX1P20591 662 aa17.19■□□□□ 0.34
CXCL12-208ENST00000496375 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
CXCL12-208ENST00000496375 SENP6Q9GZR1 1112 aaPredicted RBP17.19■□□□□ 0.34
CXCL12-208ENST00000496375 MKNK2Q9HBH9 465 aa17.19■□□□□ 0.34
CXCL12-208ENST00000496375 ADAMTS5Q9UNA0 930 aa17.19■□□□□ 0.34
CXCL12-208ENST00000496375 ZNFX1Q9P2E3 1918 aaKnown RBP17.19■□□□□ 0.34
CXCL12-208ENST00000496375 GPAA1O43292 621 aa17.18■□□□□ 0.34
CXCL12-208ENST00000496375 SLC25A27O95847 323 aa17.18■□□□□ 0.34
CXCL12-208ENST00000496375 ZFYP08048 801 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-208ENST00000496375 FCER1AP12319 257 aa17.18■□□□□ 0.34
CXCL12-208ENST00000496375 RASA1P20936 1047 aa17.18■□□□□ 0.34
CXCL12-208ENST00000496375 FAM83BQ5T0W9 1011 aa17.18■□□□□ 0.34
CXCL12-208ENST00000496375 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
CXCL12-208ENST00000496375 EPB41L4AQ9HCS5 686 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-208ENST00000496375 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
CXCL12-208ENST00000496375 ROBO3Q96MS0 1386 aa17.17■□□□□ 0.34
CXCL12-208ENST00000496375 M0R2C6 588 aa17.17■□□□□ 0.34
CXCL12-208ENST00000496375 DNM1LO00429 736 aa17.17■□□□□ 0.34
CXCL12-208ENST00000496375 ERC2O15083 957 aa17.17■□□□□ 0.34
CXCL12-208ENST00000496375 TDO2P48775 406 aa17.17■□□□□ 0.34
CXCL12-208ENST00000496375 ANO1Q5XXA6 986 aa17.17■□□□□ 0.34
CXCL12-208ENST00000496375 MAML3Q96JK9 1138 aa17.17■□□□□ 0.34
CXCL12-208ENST00000496375 MMP19Q99542 508 aa17.17■□□□□ 0.34
CXCL12-208ENST00000496375 UBE2OQ9C0C9 1292 aaKnown RBP17.17■□□□□ 0.34
CXCL12-208ENST00000496375 ZBTB47Q9UFB7 747 aaPredicted RBP17.17■□□□□ 0.34
CXCL12-208ENST00000496375 VWA5AO00534 786 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 SEPT4O43236 478 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 APPP05067 770 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 GNAT2P19087 354 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 ATN1P54259 1190 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-208ENST00000496375 PRAMEF19Q5SWL8 479 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 GJC2Q5T442 439 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-208ENST00000496375 RIOX2Q8IUF8 465 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 NUP88Q99567 741 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-208ENST00000496375 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 OSBPL3Q9H4L5 887 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
CXCL12-208ENST00000496375 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
CXCL12-208ENST00000496375 PGK2P07205 417 aa17.15■□□□□ 0.34
CXCL12-208ENST00000496375 STAT3P40763 770 aa17.15■□□□□ 0.34
CXCL12-208ENST00000496375 PDE1AP54750 535 aa17.15■□□□□ 0.34
CXCL12-208ENST00000496375 LRRFIP1Q32MZ4 808 aaKnown RBP17.15■□□□□ 0.34
CXCL12-208ENST00000496375 TDHQ8IZJ6 230 aa17.15■□□□□ 0.34
CXCL12-208ENST00000496375 ARRDC4Q8NCT1 418 aa17.15■□□□□ 0.34
CXCL12-208ENST00000496375 REPS2Q8NFH8 660 aa17.15■□□□□ 0.34
CXCL12-208ENST00000496375 MYH4Q9Y623 1939 aa17.15■□□□□ 0.34
CXCL12-208ENST00000496375 PLXNA1Q9UIW2 1896 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 PATL2C9JE40 543 aaKnown RBP17.14■□□□□ 0.33
CXCL12-208ENST00000496375 KBTBD13C9JR72 458 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 F5H6K3 240 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 PRDM1O75626 825 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 NDUFB10O96000 172 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
CXCL12-208ENST00000496375 MDM2Q00987 491 aaPredicted RBP17.14■□□□□ 0.33
CXCL12-208ENST00000496375 KLRC3Q07444 240 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 KCTD2Q14681 263 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 LRIT3Q3SXY7 679 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 IFNL3Q8IZI9 196 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 ZNF444Q8N0Y2 327 aaPredicted RBP17.14■□□□□ 0.33
CXCL12-208ENST00000496375 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 CLIP2Q9UDT6 1046 aa17.14■□□□□ 0.33
CXCL12-208ENST00000496375 COL6A3P12111 3177 aa17.13■□□□□ 0.33
CXCL12-208ENST00000496375 IGKV6D-41A0A0C4DH26 115 aa17.13■□□□□ 0.33
CXCL12-208ENST00000496375 COPB2P35606 906 aa17.13■□□□□ 0.33
CXCL12-208ENST00000496375 RTP1P59025 263 aa17.13■□□□□ 0.33
CXCL12-208ENST00000496375 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
CXCL12-208ENST00000496375 TICAM2Q86XR7 235 aa17.13■□□□□ 0.33
CXCL12-208ENST00000496375 SEC62Q99442 399 aaKnown RBP17.13■□□□□ 0.33
CXCL12-208ENST00000496375 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
CXCL12-208ENST00000496375 ZNF287Q9HBT7 754 aa17.13■□□□□ 0.33
CXCL12-208ENST00000496375 NEFLP07196 543 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 ZNF792Q3KQV3 632 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 FAM47AQ5JRC9 791 aa17.12■□□□□ 0.33
CXCL12-208ENST00000496375 PLEKHM2Q8IWE5 1019 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms