RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
RHBDD3-207ENST00000496342 MTMR7Q9Y216 660 aa20.8■□□□□ 0.92
RHBDD3-207ENST00000496342 ZNF236Q9UL36 1845 aa20.8■□□□□ 0.92
RHBDD3-207ENST00000496342 RAD50Q92878 1312 aa20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 NEFLP07196 543 aa20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 MAPK4P31152 587 aa20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 PTH1RQ03431 593 aa20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 PLS1Q14651 629 aa20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 NBPF11Q86T75 865 aa20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 CCAR1Q8IX12 1150 aaKnown RBP20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 STAG1Q8WVM7 1258 aa20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 MKL1Q969V6 931 aa20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 MOV10L1Q9BXT6 1211 aaKnown RBP20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 BIN2Q9UBW5 565 aaPredicted RBP20.79■□□□□ 0.92
RHBDD3-207ENST00000496342 SMCHD1A6NHR9 2005 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 INHAP05111 366 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 RGS19P49795 217 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 TRIM32Q13049 653 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 IRF5Q13568 498 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 SLFN13Q68D06 897 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 MFSD6Q6ZSS7 791 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 PLEKHH3Q7Z736 793 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 SLAIN1Q8ND83 568 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 SPATC1LQ9H0A9 340 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 CWC22Q9HCG8 908 aaKnown RBP20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 HOXC10Q9NYD6 342 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 PPP1R9AQ9ULJ8 1098 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 FRMPD3Q5JV73 1810 aa20.78■□□□□ 0.92
RHBDD3-207ENST00000496342 ZNF213O14771 459 aa20.77■□□□□ 0.92
RHBDD3-207ENST00000496342 EN2P19622 333 aaPredicted RBP20.77■□□□□ 0.92
RHBDD3-207ENST00000496342 TMEM132BQ14DG7 1078 aa20.77■□□□□ 0.92
RHBDD3-207ENST00000496342 ZKSCAN3Q9BRR0 538 aa20.77■□□□□ 0.92
RHBDD3-207ENST00000496342 ISY1Q9ULR0 285 aaKnown RBP20.77■□□□□ 0.92
RHBDD3-207ENST00000496342 SGSM2O43147 1006 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 CCNA1P78396 465 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 CCL14Q16627 93 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 MORN1Q5T089 497 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 GMCL1P1Q8NEA9 526 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 REPS2Q8NFH8 660 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 TRIB2Q92519 343 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 NUDT12Q9BQG2 462 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 UNC93B1Q9H1C4 597 aa20.76■□□□□ 0.91
RHBDD3-207ENST00000496342 B4E1Z4 1266 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 VWA5AO00534 786 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 CCL5P13501 91 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 ERCC3P19447 782 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 RUFY2Q8WXA3 655 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 USP6NLQ92738 828 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 SLF1Q9BQI6 1058 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 ADAMTS5Q9UNA0 930 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 TAF6LQ9Y6J9 622 aa20.75■□□□□ 0.91
RHBDD3-207ENST00000496342 BMP3P12645 472 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 MCCP23508 829 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 MLLT1Q03111 559 aaPredicted RBP20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 IMMTQ16891 758 aaKnown RBP20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 KCTD1Q719H9 257 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 NCAPG2Q86XI2 1143 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 MB21D1Q8N884 522 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 PXYLP1Q8TE99 480 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 SOCS4Q8WXH5 440 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 KIFC2Q96AC6 838 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 TMEM106CQ9BVX2 250 aa20.74■□□□□ 0.91
RHBDD3-207ENST00000496342 KDM4AO75164 1064 aa20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 PTPREP23469 700 aa20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 NOVP48745 357 aa20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 UBXN2AP68543 259 aa20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 RCSD1Q6JBY9 416 aa20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 SHISA4Q96DD7 197 aa20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 TMEM47Q9BQJ4 181 aa20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 RNF41Q9H4P4 317 aaPredicted RBP20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 ZNF214Q9UL59 606 aaPredicted RBP20.73■□□□□ 0.91
RHBDD3-207ENST00000496342 TMEM232C9JQI7 657 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 RGS2P41220 211 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 SLC4A3P48751 1232 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 MAP2K5Q13163 448 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 GRB14Q14449 540 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 NPLOC4Q8TAT6 608 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 APBA2Q99767 749 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 RNF208Q9H0X6 261 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 FLRT1Q9NZU1 646 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 CTNNA3Q9UI47 895 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 SYNPO2Q9UMS6 1093 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 IVNS1ABPQ9Y6Y0 642 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 MCM3APO60318 1980 aa20.72■□□□□ 0.91
RHBDD3-207ENST00000496342 BRCA2P51587 3418 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 MYH6P13533 1939 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 HMGCRP04035 888 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 CYP21A2P08686 494 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 SLC1A4P43007 532 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 SNAP25P60880 206 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 CCDC96Q2M329 555 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 BMP2KLQ5H9B9 411 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 CPXCR1Q8N123 301 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 ESR2Q92731 530 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 TCP11L1Q9NUJ3 509 aa20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 FRMPD2Q68DX3 1309 aaPredicted RBP20.71■□□□□ 0.91
RHBDD3-207ENST00000496342 SLC15A5A6NIM6 579 aa20.7■□□□□ 0.9
RHBDD3-207ENST00000496342 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.9
RHBDD3-207ENST00000496342 TOP1P11387 765 aaKnown RBP20.7■□□□□ 0.9
RHBDD3-207ENST00000496342 PCP11498 1178 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms