RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 RASAL3Q86YV0 1011 aa12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 CDCA5Q96FF9 252 aa12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 CHAMP1Q96JM3 812 aa12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 VEZTQ9HBM0 779 aa12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 HERC5Q9UII4 1024 aaKnown RBP12.44□□□□□ -0.42
ECHDC3-204ENST00000495787 POLR2AP24928 1970 aaKnown RBP12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 PRPF40AO75400 957 aaKnown RBP12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 PLEKHA8P1O95397 391 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 TTLL1O95922 423 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 TNNI2P48788 182 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 FKBP1BP68106 108 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 KRT85P78386 507 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 GUCY1B3Q02153 619 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 DNM1Q05193 864 aaKnown RBP12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 TRIM29Q14134 588 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 NBPF9Q3BBW0 867 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 FOXD4L6Q3SYB3 417 aaPredicted RBP12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 KRT40Q6A162 431 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 FOXD4L3Q6VB84 417 aaPredicted RBP12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 LZTS2Q9BRK4 669 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 CNPY2Q9Y2B0 182 aa12.43□□□□□ -0.42
ECHDC3-204ENST00000495787 CNTNAP5Q8WYK1 1306 aa12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 PALM3A6NDB9 673 aaPredicted RBP12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 MPHOSPH10O00566 681 aaKnown RBP12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 TBC1D12O60347 775 aa12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 TNFAIP1Q13829 316 aa12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 ATL3Q6DD88 541 aa12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 OTUD7BQ6GQQ9 843 aa12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 CMTR1Q8N1G2 835 aaKnown RBP12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 CCDC82Q8N4S0 544 aa12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 SRBD1Q8N5C6 995 aaKnown RBP12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 AIFM3Q96NN9 605 aa12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 MAD2L2Q9UI95 211 aa12.42□□□□□ -0.42
ECHDC3-204ENST00000495787 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 NCLP19338 710 aaKnown RBP12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 SMARCA1P28370 1054 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 GUCY1A2P33402 732 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 PKN1Q16512 942 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 ABCB5Q2M3G0 1257 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 TMEM179Q6ZVK1 233 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 BRAPQ7Z569 592 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 ZNF296Q8WUU4 475 aaPredicted RBP12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 ZNF396Q96N95 335 aaPredicted RBP12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 KANSL2Q9H9L4 492 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 NYAP2Q9P242 653 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 V9GY48 417 aaPredicted RBP12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 PAPPA2Q9BXP8 1791 aa12.41□□□□□ -0.42
ECHDC3-204ENST00000495787 ASTN2O75129 1339 aaPredicted RBP12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 XBP1P17861 261 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 MAP3K10Q02779 954 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 KLHL40Q2TBA0 621 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 NOM1Q5C9Z4 860 aaKnown RBP12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 ANGEL2Q5VTE6 544 aaKnown RBP12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 FAM173BQ6P4H8 233 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 MKL1Q969V6 931 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 TMEM39BQ9GZU3 492 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 SCAND2PQ9GZW5 306 aaPredicted RBP12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 GJB4Q9NTQ9 266 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 DDX49Q9Y6V7 483 aaKnown RBP12.4□□□□□ -0.42
ECHDC3-204ENST00000495787 KLRF2D3W0D1 207 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 FIBPO43427 364 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 MBD3O95983 291 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 MMP1P03956 469 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 SNHG28P0DPA3 235 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 PDHBP11177 359 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 RASA3Q14644 834 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 ASPRV1Q53RT3 343 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 FBXO46Q6PJ61 603 aaPredicted RBP12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 SPZ1Q9BXG8 430 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 GDPD2Q9HCC8 539 aa12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
ECHDC3-204ENST00000495787 ELP1O95163 1332 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 PITPNM2Q9BZ72 1349 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 USP17L5A8MUK1 530 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 KIF28PB7ZC32 967 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 GDF11O95390 407 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 TBC1D8O95759 1140 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 SCG2P13521 617 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 EEF2P13639 858 aaKnown RBP12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 U2AF2P26368 475 aaKnown RBP eCLIP12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 ICA1Q05084 483 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 SEPT2Q15019 361 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 PFKFB3Q16875 520 aaPredicted RBP12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 CLEC10AQ8IUN9 316 aa12.38□□□□□ -0.43
ECHDC3-204ENST00000495787 FAM177A1Q8N128 213 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms