RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 IFNL3Q8IZI9 196 aa28.27■■■□□ 2.12
RHBDD3-206ENST00000493894 FBXO28Q9NVF7 368 aa28.27■■■□□ 2.12
RHBDD3-206ENST00000493894 SLC5A4Q9NY91 659 aa28.27■■■□□ 2.12
RHBDD3-206ENST00000493894 PFASO15067 1338 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 SALL3Q9BXA9 1300 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 MSCO60682 206 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 CYP2C19P33261 490 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 TMEM132BQ14DG7 1078 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 OLFML2BQ68BL8 750 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 ABRAQ8N0Z2 381 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 SEC62Q99442 399 aaKnown RBP28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 PRO3102Q9H379 93 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 NYAP2Q9P242 653 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 DDX20Q9UHI6 824 aaKnown RBP28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 PPP1R9AQ9ULJ8 1098 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 TRIOBPQ9H2D6 2365 aa28.26■■■□□ 2.11
RHBDD3-206ENST00000493894 COL11A1P12107 1806 aaPredicted RBP28.25■■■□□ 2.11
RHBDD3-206ENST00000493894 SLC25A27O95847 323 aa28.25■■■□□ 2.11
RHBDD3-206ENST00000493894 CNGA1P29973 690 aa28.25■■■□□ 2.11
RHBDD3-206ENST00000493894 ZMYM1Q5SVZ6 1142 aa28.25■■■□□ 2.11
RHBDD3-206ENST00000493894 ADAMTS5Q9UNA0 930 aa28.25■■■□□ 2.11
RHBDD3-206ENST00000493894 ANKRD45Q5TZF3 282 aa28.24■■■□□ 2.11
RHBDD3-206ENST00000493894 ZNF444Q8N0Y2 327 aaPredicted RBP28.24■■■□□ 2.11
RHBDD3-206ENST00000493894 YTHDC1Q96MU7 727 aaKnown RBP28.24■■■□□ 2.11
RHBDD3-206ENST00000493894 NAPBQ9H115 298 aa28.24■■■□□ 2.11
RHBDD3-206ENST00000493894 VWA5AO00534 786 aa28.23■■■□□ 2.11
RHBDD3-206ENST00000493894 PRDM1O75626 825 aa28.23■■■□□ 2.11
RHBDD3-206ENST00000493894 IGHA2P01877 340 aa28.23■■■□□ 2.11
RHBDD3-206ENST00000493894 COL6A1P12109 1028 aa28.23■■■□□ 2.11
RHBDD3-206ENST00000493894 FCER1AP12319 257 aa28.23■■■□□ 2.11
RHBDD3-206ENST00000493894 CYBAP13498 195 aa28.23■■■□□ 2.11
RHBDD3-206ENST00000493894 HDAC1Q13547 482 aaPredicted RBP28.23■■■□□ 2.11
RHBDD3-206ENST00000493894 IGKV6D-41A0A0C4DH26 115 aa28.22■■■□□ 2.11
RHBDD3-206ENST00000493894 COBLO75128 1261 aa28.22■■■□□ 2.11
RHBDD3-206ENST00000493894 PDE4BQ07343 736 aa28.22■■■□□ 2.11
RHBDD3-206ENST00000493894 RIOX2Q8IUF8 465 aa28.22■■■□□ 2.11
RHBDD3-206ENST00000493894 F5H6K3 240 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 NDUFB10O96000 172 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 SLC3A2P08195 630 aaKnown RBP28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 COPB2P35606 906 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 KLRC3Q07444 240 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 TRPV1Q8NER1 839 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 NUP88Q99567 741 aaPredicted RBP28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 SLF1Q9BQI6 1058 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 CLIP2Q9UDT6 1046 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 ZMYND8Q9ULU4 1186 aaPredicted RBP28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 MYH4Q9Y623 1939 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 PLIN4Q96Q06 1357 aa28.21■■■□□ 2.11
RHBDD3-206ENST00000493894 A0A1W2PPC1 479 aa28.2■■■□□ 2.1
RHBDD3-206ENST00000493894 STAT3P40763 770 aa28.2■■■□□ 2.1
RHBDD3-206ENST00000493894 MMP19Q99542 508 aa28.2■■■□□ 2.1
RHBDD3-206ENST00000493894 ZNF214Q9UL59 606 aaPredicted RBP28.2■■■□□ 2.1
RHBDD3-206ENST00000493894 RANBP2P49792 3224 aaKnown RBP28.2■■■□□ 2.1
RHBDD3-206ENST00000493894 PPARAQ07869 468 aa28.19■■■□□ 2.1
RHBDD3-206ENST00000493894 KCTD2Q14681 263 aa28.19■■■□□ 2.1
RHBDD3-206ENST00000493894 REPS2Q8NFH8 660 aa28.19■■■□□ 2.1
RHBDD3-206ENST00000493894 EVI5LQ96CN4 794 aa28.19■■■□□ 2.1
RHBDD3-206ENST00000493894 CEP95Q96GE4 821 aa28.19■■■□□ 2.1
RHBDD3-206ENST00000493894 MAML3Q96JK9 1138 aa28.19■■■□□ 2.1
RHBDD3-206ENST00000493894 STAP2Q9UGK3 403 aa28.19■■■□□ 2.1
RHBDD3-206ENST00000493894 SYNPO2Q9UMS6 1093 aa28.19■■■□□ 2.1
RHBDD3-206ENST00000493894 TTLL1O95922 423 aa28.18■■■□□ 2.1
RHBDD3-206ENST00000493894 TSPY3P0CV98 308 aa28.18■■■□□ 2.1
RHBDD3-206ENST00000493894 TSPY8P0CW00 308 aa28.18■■■□□ 2.1
RHBDD3-206ENST00000493894 MTMR4Q9NYA4 1195 aa28.18■■■□□ 2.1
RHBDD3-206ENST00000493894 AAMPQ13685 434 aa28.17■■■□□ 2.1
RHBDD3-206ENST00000493894 TEX13BQ9BXU2 312 aa28.17■■■□□ 2.1
RHBDD3-206ENST00000493894 DNM1LO00429 736 aa28.16■■■□□ 2.1
RHBDD3-206ENST00000493894 SEPT4O43236 478 aa28.16■■■□□ 2.1
RHBDD3-206ENST00000493894 SYN1P17600 705 aa28.16■■■□□ 2.1
RHBDD3-206ENST00000493894 PDE1AP54750 535 aa28.16■■■□□ 2.1
RHBDD3-206ENST00000493894 LRRC47Q8N1G4 583 aaKnown RBP28.16■■■□□ 2.1
RHBDD3-206ENST00000493894 PRPF38AQ8NAV1 312 aaKnown RBP28.16■■■□□ 2.1
RHBDD3-206ENST00000493894 NEDD1Q8NHV4 660 aa28.16■■■□□ 2.1
RHBDD3-206ENST00000493894 MKL1Q969V6 931 aa28.16■■■□□ 2.1
RHBDD3-206ENST00000493894 LRRC26Q2I0M4 334 aa28.15■■■□□ 2.1
RHBDD3-206ENST00000493894 CCDC129Q6ZRS4 1044 aa28.15■■■□□ 2.1
RHBDD3-206ENST00000493894 GMCL1P1Q8NEA9 526 aa28.15■■■□□ 2.1
RHBDD3-206ENST00000493894 SENP6Q9GZR1 1112 aaPredicted RBP28.15■■■□□ 2.1
RHBDD3-206ENST00000493894 PGK2P07205 417 aa28.14■■■□□ 2.1
RHBDD3-206ENST00000493894 FAM47AQ5JRC9 791 aa28.14■■■□□ 2.1
RHBDD3-206ENST00000493894 SNRNP48Q6IEG0 339 aaKnown RBP28.14■■■□□ 2.1
RHBDD3-206ENST00000493894 GDF15Q99988 308 aa28.14■■■□□ 2.1
RHBDD3-206ENST00000493894 CTDP1Q9Y5B0 961 aaPredicted RBP28.14■■■□□ 2.1
RHBDD3-206ENST00000493894 ZNFX1Q9P2E3 1918 aaKnown RBP28.14■■■□□ 2.09
RHBDD3-206ENST00000493894 PLXNA1Q9UIW2 1896 aa28.13■■■□□ 2.09
RHBDD3-206ENST00000493894 FOXP2O15409 715 aa28.13■■■□□ 2.09
RHBDD3-206ENST00000493894 TFAP4Q01664 338 aa28.13■■■□□ 2.09
RHBDD3-206ENST00000493894 ARRDC4Q8NCT1 418 aa28.13■■■□□ 2.09
RHBDD3-206ENST00000493894 KIFC2Q96AC6 838 aa28.13■■■□□ 2.09
RHBDD3-206ENST00000493894 FEM1BQ9UK73 627 aa28.13■■■□□ 2.09
RHBDD3-206ENST00000493894 DIS3Q9Y2L1 958 aaKnown RBP28.13■■■□□ 2.09
RHBDD3-206ENST00000493894 KBTBD13C9JR72 458 aa28.12■■■□□ 2.09
RHBDD3-206ENST00000493894 ZBED4O75132 1171 aa28.12■■■□□ 2.09
RHBDD3-206ENST00000493894 BMP8BP34820 402 aa28.12■■■□□ 2.09
RHBDD3-206ENST00000493894 PPP4R3BQ5MIZ7 849 aa28.12■■■□□ 2.09
RHBDD3-206ENST00000493894 HELLSQ9NRZ9 838 aa28.12■■■□□ 2.09
RHBDD3-206ENST00000493894 NRBP1Q9UHY1 535 aa28.12■■■□□ 2.09
RHBDD3-206ENST00000493894 ZNF792Q3KQV3 632 aa28.11■■■□□ 2.09
RHBDD3-206ENST00000493894 PRAMEF19Q5SWL8 479 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms