RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PRAMEF19Q5SWL8 479 aa20.91■□□□□ 0.94
COL9A1-210ENST00000493682 DDRGK1Q96HY6 314 aa20.91■□□□□ 0.94
COL9A1-210ENST00000493682 ADAMTS5Q9UNA0 930 aa20.91■□□□□ 0.94
COL9A1-210ENST00000493682 SLC4A4Q9Y6R1 1079 aa20.91■□□□□ 0.94
COL9A1-210ENST00000493682 KBTBD13C9JR72 458 aa20.9■□□□□ 0.94
COL9A1-210ENST00000493682 DLL1O00548 723 aa20.9■□□□□ 0.94
COL9A1-210ENST00000493682 FCER1AP12319 257 aa20.9■□□□□ 0.94
COL9A1-210ENST00000493682 CTR9Q6PD62 1173 aa20.9■□□□□ 0.94
COL9A1-210ENST00000493682 MAML3Q96JK9 1138 aa20.9■□□□□ 0.94
COL9A1-210ENST00000493682 KANSL2Q9H9L4 492 aa20.9■□□□□ 0.94
COL9A1-210ENST00000493682 FBXO28Q9NVF7 368 aa20.9■□□□□ 0.94
COL9A1-210ENST00000493682 STXBP5LQ9Y2K9 1186 aa20.9■□□□□ 0.94
COL9A1-210ENST00000493682 SLC25A27O95847 323 aa20.89■□□□□ 0.93
COL9A1-210ENST00000493682 SLC39A5Q6ZMH5 540 aa20.89■□□□□ 0.93
COL9A1-210ENST00000493682 PUS7LQ9H0K6 701 aaKnown RBP20.89■□□□□ 0.93
COL9A1-210ENST00000493682 PRKAG2Q9UGJ0 569 aa20.89■□□□□ 0.93
COL9A1-210ENST00000493682 ATP11BQ9Y2G3 1177 aa20.89■□□□□ 0.93
COL9A1-210ENST00000493682 PARP14Q460N5 1801 aa20.88■□□□□ 0.93
COL9A1-210ENST00000493682 MYCNP04198 464 aaPredicted RBP20.88■□□□□ 0.93
COL9A1-210ENST00000493682 ZSCAN25Q6NSZ9 544 aa20.88■□□□□ 0.93
COL9A1-210ENST00000493682 LRRCC1Q9C099 1032 aa20.88■□□□□ 0.93
COL9A1-210ENST00000493682 SMARCA5O60264 1052 aaPredicted RBP20.87■□□□□ 0.93
COL9A1-210ENST00000493682 MMP19Q99542 508 aa20.87■□□□□ 0.93
COL9A1-210ENST00000493682 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
COL9A1-210ENST00000493682 GOPCQ9HD26 462 aa20.87■□□□□ 0.93
COL9A1-210ENST00000493682 RCAN3Q9UKA8 241 aa20.87■□□□□ 0.93
COL9A1-210ENST00000493682 VWA5AO00534 786 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 PGK2P07205 417 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 ADCYAP1R1P41586 468 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 SNX17Q15036 470 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 LRRC41Q15345 812 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 FAM47AQ5JRC9 791 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 RIOX2Q8IUF8 465 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 STRBPQ96SI9 672 aaKnown RBP20.86■□□□□ 0.93
COL9A1-210ENST00000493682 ARPP21Q9UBL0 812 aaPredicted RBP20.86■□□□□ 0.93
COL9A1-210ENST00000493682 PPP1R9AQ9ULJ8 1098 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 MYH7P12883 1935 aa20.86■□□□□ 0.93
COL9A1-210ENST00000493682 POTEB2H3BUK9 544 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 RAD21O60216 631 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 STAT3P40763 770 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 TRIM60Q495X7 471 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 FAM83BQ5T0W9 1011 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 C20orf194Q5TEA3 1177 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 FERMT2Q96AC1 680 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 ECHDC1Q9NTX5 307 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 NRBP1Q9UHY1 535 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 ZNF214Q9UL59 606 aaPredicted RBP20.85■□□□□ 0.93
COL9A1-210ENST00000493682 LTBP2Q14767 1821 aa20.85■□□□□ 0.93
COL9A1-210ENST00000493682 COL11A1P12107 1806 aaPredicted RBP20.84■□□□□ 0.93
COL9A1-210ENST00000493682 KCTD2Q14681 263 aa20.84■□□□□ 0.93
COL9A1-210ENST00000493682 FAM109BQ6ICB4 259 aaPredicted RBP20.84■□□□□ 0.93
COL9A1-210ENST00000493682 REPS2Q8NFH8 660 aa20.84■□□□□ 0.93
COL9A1-210ENST00000493682 PRDM5Q9NQX1 630 aaPredicted RBP20.84■□□□□ 0.93
COL9A1-210ENST00000493682 ZNF792Q3KQV3 632 aa20.83■□□□□ 0.93
COL9A1-210ENST00000493682 SBK1Q52WX2 424 aa20.83■□□□□ 0.93
COL9A1-210ENST00000493682 TINF2Q9BSI4 451 aa20.83■□□□□ 0.93
COL9A1-210ENST00000493682 XPNPEP3Q9NQH7 507 aa20.83■□□□□ 0.93
COL9A1-210ENST00000493682 DIS3Q9Y2L1 958 aaKnown RBP20.83■□□□□ 0.93
COL9A1-210ENST00000493682 ZNFX1Q9P2E3 1918 aaKnown RBP20.82■□□□□ 0.92
COL9A1-210ENST00000493682 A0A0C4DFX4 3053 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 GSG1L2A8MUP6 293 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 RARBP10826 455 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 TAL1P17542 331 aaPredicted RBP20.82■□□□□ 0.92
COL9A1-210ENST00000493682 RASA1P20936 1047 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 COPB2P35606 906 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 C1orf53Q5VUE5 145 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 STK11IPQ8N1F8 1099 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 NUP88Q99567 741 aaPredicted RBP20.82■□□□□ 0.92
COL9A1-210ENST00000493682 PDLIM7Q9NR12 457 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 PHF24Q9UPV7 400 aa20.82■□□□□ 0.92
COL9A1-210ENST00000493682 LAMA2P24043 3122 aaKnown RBP20.81■□□□□ 0.92
COL9A1-210ENST00000493682 SHHQ15465 462 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 GIMAP6Q6P9H5 292 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 SH3RF1Q7Z6J0 888 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 KBTBD3Q8NAB2 608 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 BADQ92934 168 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 OSBP2Q969R2 916 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 GUCD1Q96NT3 240 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 MKNK2Q9HBH9 465 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 NYAP2Q9P242 653 aa20.81■□□□□ 0.92
COL9A1-210ENST00000493682 GREB1LQ9C091 1923 aaPredicted RBP20.8■□□□□ 0.92
COL9A1-210ENST00000493682 TRIM43BA6NCK2 446 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 MINDY4BA8MYZ0 360 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 F5H6K3 240 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 PGK1P00558 417 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 ZNF865P0CJ78 1059 aaPredicted RBP20.8■□□□□ 0.92
COL9A1-210ENST00000493682 TLE2Q04725 743 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 KLRC3Q07444 240 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 C9orf50Q5SZB4 431 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 APPBP2Q92624 585 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 TRIM43Q96BQ3 446 aaPredicted RBP20.8■□□□□ 0.92
COL9A1-210ENST00000493682 SLF1Q9BQI6 1058 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 ROBO3Q96MS0 1386 aa20.8■□□□□ 0.92
COL9A1-210ENST00000493682 NDUFB10O96000 172 aa20.79■□□□□ 0.92
COL9A1-210ENST00000493682 TSHZ3Q63HK5 1081 aa20.79■□□□□ 0.92
COL9A1-210ENST00000493682 RNF180Q86T96 592 aa20.79■□□□□ 0.92
COL9A1-210ENST00000493682 FAM161BQ96MY7 647 aa20.79■□□□□ 0.92
COL9A1-210ENST00000493682 TEX13BQ9BXU2 312 aa20.79■□□□□ 0.92
COL9A1-210ENST00000493682 PLXNA1Q9UIW2 1896 aa20.78■□□□□ 0.92
COL9A1-210ENST00000493682 RNF113AO15541 343 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms