RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 SLFN13Q68D06 897 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 LBX2Q6XYB7 198 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 GPR142Q7Z601 462 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 PLEKHH3Q7Z736 793 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 TBC1D10CQ8IV04 446 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 MGAMO43451 1857 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 ORC4O43929 436 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 FGRP09769 529 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 MCCP23508 829 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 CCNA1P78396 465 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 PTH1RQ03431 593 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 TRIM32Q13049 653 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 NUDT12Q9BQG2 462 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 MOV10L1Q9BXT6 1211 aaKnown RBP11.17□□□□□ -0.62
SGIP1-213ENST00000493564 SPATC1LQ9H0A9 340 aa11.17□□□□□ -0.62
SGIP1-213ENST00000493564 KIAA0100Q14667 2235 aaKnown RBP11.17□□□□□ -0.62
SGIP1-213ENST00000493564 INHAP05111 366 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 CCL5P13501 91 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 ERCC3P19447 782 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 UBXN2AP68543 259 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 IRF5Q13568 498 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 TMEM132BQ14DG7 1078 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 MORN1Q5T089 497 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 RASGRP2Q7LDG7 609 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 NCAPG2Q86XI2 1143 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 SLAIN1Q8ND83 568 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 STAG1Q8WVM7 1258 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 RUFY2Q8WXA3 655 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 KIFC2Q96AC6 838 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 SLF1Q9BQI6 1058 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 DSCC1Q9BVC3 393 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 RNF208Q9H0X6 261 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 UNC93B1Q9H1C4 597 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 PPP1R9AQ9ULJ8 1098 aa11.16□□□□□ -0.62
SGIP1-213ENST00000493564 ZMYM6O95789 1325 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 NEDD4P46934 1319 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 TMEM232C9JQI7 657 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 VWA5AO00534 786 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 BMP3P12645 472 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 PTPREP23469 700 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 SLC1A4P43007 532 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 SNAP25P60880 206 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 CCL14Q16627 93 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 IMMTQ16891 758 aaKnown RBP11.15□□□□□ -0.62
SGIP1-213ENST00000493564 KCTD1Q719H9 257 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 CPXCR1Q8N123 301 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 GMCL1P1Q8NEA9 526 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 USP6NLQ92738 828 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 TMEM47Q9BQJ4 181 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 CTNNA3Q9UI47 895 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 ADAMTS5Q9UNA0 930 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 BRCA2P51587 3418 aa11.15□□□□□ -0.62
SGIP1-213ENST00000493564 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
SGIP1-213ENST00000493564 B4E1Z4 1266 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 SGSM2O43147 1006 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 KDM4AO75164 1064 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 STAT3P40763 770 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 RGS2P41220 211 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 IKQ13123 557 aaPredicted RBP11.14□□□□□ -0.63
SGIP1-213ENST00000493564 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 DPP9Q86TI2 863 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 MB21D1Q8N884 522 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 PRPF38AQ8NAV1 312 aaKnown RBP11.14□□□□□ -0.63
SGIP1-213ENST00000493564 TRIB2Q92519 343 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 ESR2Q92731 530 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 RNF41Q9H4P4 317 aaPredicted RBP11.14□□□□□ -0.63
SGIP1-213ENST00000493564 RAVER2Q9HCJ3 691 aaKnown RBP11.14□□□□□ -0.63
SGIP1-213ENST00000493564 FEM1BQ9UK73 627 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 CTDP1Q9Y5B0 961 aaPredicted RBP11.14□□□□□ -0.63
SGIP1-213ENST00000493564 IVNS1ABPQ9Y6Y0 642 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 PLIN4Q96Q06 1357 aa11.14□□□□□ -0.63
SGIP1-213ENST00000493564 RLFQ13129 1914 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 MYH4Q9Y623 1939 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 FRMPD2Q68DX3 1309 aaPredicted RBP11.13□□□□□ -0.63
SGIP1-213ENST00000493564 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 ZBED4O75132 1171 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 HMGCRP04035 888 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 CENPBP07199 599 aaPredicted RBP11.13□□□□□ -0.63
SGIP1-213ENST00000493564 ADORA2AP29274 412 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 REPS2Q8NFH8 660 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 NPLOC4Q8TAT6 608 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 SOCS4Q8WXH5 440 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 DEFB118Q96PH6 123 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 GPCPD1Q9NPB8 672 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 TCP11L1Q9NUJ3 509 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 FLRT1Q9NZU1 646 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 RIPK3Q9Y572 518 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 TAF6LQ9Y6J9 622 aa11.13□□□□□ -0.63
SGIP1-213ENST00000493564 COBLO75128 1261 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 TFRCP02786 760 aaKnown RBP11.12□□□□□ -0.63
SGIP1-213ENST00000493564 PGK2P07205 417 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 TOP1P11387 765 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms