RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 ARHGEF10LQ9HCE6 1279 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 MTMR7Q9Y216 660 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 TRPM7Q96QT4 1865 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 PFKFB2O60825 505 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 CCT2P78371 535 aaKnown RBP10.94□□□□□ -0.66
CSTF1-206ENST00000493039 SCRN1Q12765 414 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 STK3Q13188 491 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 PPIL2Q13356 520 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 NBPF11Q86T75 865 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 MS4A4AQ96JQ5 239 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 MAD2L2Q9UI95 211 aa10.94□□□□□ -0.66
CSTF1-206ENST00000493039 PALM3A6NDB9 673 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-206ENST00000493039 GOLGA8BA8MQT2 603 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 ZBTB43O43298 467 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 RRP9O43818 475 aaKnown RBP10.93□□□□□ -0.66
CSTF1-206ENST00000493039 GOLGA8HP0CJ92 632 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 HMGCS2P54868 508 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 FUT2Q10981 343 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 NTRK3Q16288 839 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 SH3D19Q5HYK7 790 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 PPP4R3BQ5MIZ7 849 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 SPRYD7Q5W111 196 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 SLFN13Q68D06 897 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 CMTR1Q8N1G2 835 aaKnown RBP10.93□□□□□ -0.66
CSTF1-206ENST00000493039 NUP133Q8WUM0 1156 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 WNK4Q96J92 1243 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 CPVLQ9H3G5 476 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 NID2Q14112 1375 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 A0A0G2JLL6 359 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-206ENST00000493039 FAM155AB1AL88 458 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-206ENST00000493039 CXCL11O14625 94 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 DDAH1O94760 285 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 CTDNEP1O95476 244 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 MCM2P49736 904 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 APLP1P51693 650 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 RCAN1P53805 252 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 MKRN3Q13064 507 aaKnown RBP10.93□□□□□ -0.66
CSTF1-206ENST00000493039 GRM4Q14833 912 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 TTBK2Q6IQ55 1244 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 RGMBQ6NW40 437 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 KCTD1Q719H9 257 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 PRRT2Q7Z6L0 340 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-206ENST00000493039 GTF3C6Q969F1 213 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 GMCL1Q96IK5 515 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 C12orf42Q96LP6 360 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 AS3MTQ9HBK9 375 aa10.93□□□□□ -0.66
CSTF1-206ENST00000493039 K7ELQ4 463 aaPredicted RBP10.92□□□□□ -0.66
CSTF1-206ENST00000493039 CYTH3O43739 400 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 PPFIA3O75145 1194 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 PLEKHA8P1O95397 391 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 HTRA3P83110 453 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 ZNF543Q08ER8 600 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 RASAL3Q86YV0 1011 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 ZIC5Q96T25 663 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 FEZ1Q99689 392 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 FRMPD2Q68DX3 1309 aaPredicted RBP10.92□□□□□ -0.66
CSTF1-206ENST00000493039 C19orf81C9J6K1 198 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 VCAM1P19320 739 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 METAP2P50579 478 aaKnown RBP eCLIP10.92□□□□□ -0.66
CSTF1-206ENST00000493039 ZNF157P51786 506 aaPredicted RBP10.92□□□□□ -0.66
CSTF1-206ENST00000493039 CUL4AQ13619 759 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 FAM83BQ5T0W9 1011 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 TREML2Q5T2D2 321 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 SRBD1Q8N5C6 995 aaKnown RBP10.92□□□□□ -0.66
CSTF1-206ENST00000493039 ZSCAN31Q96LW9 406 aaPredicted RBP10.92□□□□□ -0.66
CSTF1-206ENST00000493039 SLKQ9H2G2 1235 aaPredicted RBP10.92□□□□□ -0.66
CSTF1-206ENST00000493039 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
CSTF1-206ENST00000493039 ABT1Q9ULW3 272 aaKnown RBP10.92□□□□□ -0.66
CSTF1-206ENST00000493039 GOLGA8AA7E2F4 631 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 RAD21O60216 631 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 SLC1A4P43007 532 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 GPAT2Q6NUI2 795 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 CCDC83Q8IWF9 413 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 LPAR1Q92633 364 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 HHIPL1Q96JK4 782 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 PTPN18Q99952 460 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 UBA5Q9GZZ9 404 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 GOPCQ9HD26 462 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 GPCPD1Q9NPB8 672 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 SH2B1Q9NRF2 756 aaPredicted RBP10.91□□□□□ -0.66
CSTF1-206ENST00000493039 FBXO28Q9NVF7 368 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 MYH4Q9Y623 1939 aa10.91□□□□□ -0.66
CSTF1-206ENST00000493039 KLRF2D3W0D1 207 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 SLC10A3P09131 477 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 CALM1P0DP23 149 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 CALM2P0DP24 149 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 CALM3P0DP25 149 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 ZBTB48P10074 688 aaPredicted RBP10.9□□□□□ -0.66
CSTF1-206ENST00000493039 BMP3P12645 472 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 SLC16A2P36021 539 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 USP14P54578 494 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 RTN1Q16799 776 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 SYNE3Q6ZMZ3 975 aa10.9□□□□□ -0.66
CSTF1-206ENST00000493039 TMTC3Q6ZXV5 915 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms