RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 CCDC6Q16204 474 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 LACTBP83111 547 aaPredicted RBP23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 EPHA10Q5JZY3 1008 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 HS2ST1Q7LGA3 356 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 FBF1Q8TES7 1133 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 NAP1L4Q99733 375 aaKnown RBP23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 KCNK9Q9NPC2 374 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 CTNNA2P26232 953 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 ADD2P35612 726 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 NLRC4Q9NPP4 1024 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 LDHBP07195 334 aaKnown RBP23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 CYP2C19P33261 490 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 PARP10Q53GL7 1025 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 CROCCP2Q86T23 111 aa23.41■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 NR5A1Q13285 461 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 DNAJC10Q8IXB1 793 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 IFT74Q96LB3 600 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 ERVV-2B6SEH9 535 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 C6orf229H3BNL8 230 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 ZMYND10O75800 440 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 GRIPAP1Q4V328 841 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 SCG2P13521 617 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 NYAP1Q6ZVC0 841 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 RWDD2AQ9UIY3 292 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 ERCC3P19447 782 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 KRT71Q3SY84 523 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 SNX29Q8TEQ0 813 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 TUBGCP2Q9BSJ2 902 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 ANKRD2Q9GZV1 360 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 PLEKHA4Q9H4M7 779 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 MRFAP1Q9Y605 127 aa23.4■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 NDUFA10O95299 355 aa23.39■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 CLNS1AP54105 237 aaKnown RBP23.39■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 ARHGEF25Q86VW2 580 aa23.39■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.39■■□□□ 1.34
CHKB-CPT1B-203ENST00000492556 EPB41P11171 864 aaKnown RBP23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 EPHB4P54760 987 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 NCAPH2Q6IBW4 605 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 RETREG2Q8NC44 543 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 ST7Q9NRC1 585 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 JRKLQ9Y4A0 524 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PLCG2P16885 1265 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 C6orf163Q5TEZ5 329 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 TRIM31Q9BZY9 425 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PCDHB6Q9Y5E3 794 aa23.39■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 FAM13AO94988 1023 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 CTNNA1P35221 906 aaKnown RBP23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 LIFRP42702 1097 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PPP1R7Q15435 360 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 SEL1L2Q5TEA6 688 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 HINFPQ9BQA5 517 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 LZTS2Q9BRK4 669 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 EPC1Q9H2F5 836 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 SEMA3EO15041 775 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 TRAPPC10P48553 1259 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 ZNF658Q5TYW1 1059 aaPredicted RBP23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.38■■□□□ 1.332e-7■■□□□ 13.8
CHKB-CPT1B-203ENST00000492556 TMOD2Q9NZR1 351 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 FLOT1O75955 427 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 MAGEA9P43362 315 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 CHD1O14646 1710 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 B4DLN1 442 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 SETDB1Q15047 1291 aa23.38■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 CCDC174Q6PII3 467 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 SYCE1Q8N0S2 351 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PAGE5Q96GU1 130 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 NRXN1Q9ULB1 1477 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 DDAH1O94760 285 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 ATP5DP30049 168 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PHKA1P46020 1223 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PEX26Q7Z412 305 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 AATFQ9NY61 560 aaKnown RBP eCLIP23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PXDNLA1KZ92 1463 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 DESP17661 470 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PTPREP23469 700 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 ZNF804AQ7Z570 1209 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 DAAM2Q86T65 1068 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 BUB1O43683 1085 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 BUB1BO60566 1050 aaPredicted RBP23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PDE8BO95263 885 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 MRPL12P52815 198 aaKnown RBP23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PPARDQ03181 441 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 FAM47AQ5JRC9 791 aa23.37■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 IRX5P78411 483 aaPredicted RBP23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 MAP3K9P80192 1104 aa23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 TTC19Q6DKK2 380 aaPredicted RBP23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 SETDB2Q96T68 719 aa23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PPRC1Q5VV67 1664 aaKnown RBP23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PTPRMP28827 1452 aa23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 CACNA2D3Q8IZS8 1091 aa23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 CALCRLQ16602 461 aa23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 CNOT6LQ96LI5 555 aaKnown RBP23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PLCB1Q9NQ66 1216 aa23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 USPL1Q5W0Q7 1092 aa23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 NKIRAS1Q9NYS0 192 aa23.36■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 HERC4Q5GLZ8 1057 aaPredicted RBP23.35■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 PNMA8AQ86V59 439 aaPredicted RBP23.35■■□□□ 1.33
CHKB-CPT1B-203ENST00000492556 SDR42E1Q8WUS8 393 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms